Mariano Barbieri
Mariano Barbieri
(MDC) Max Delbruck Center for Molecular Medicine, (INFN) Italian National Institute of Nuclear
Verified email at mdc-berlin.de - Homepage
TitleCited byYear
Complexity of chromatin folding is captured by the strings and binders switch model
M Barbieri, M Chotalia, J Fraser, LM Lavitas, J Dostie, A Pombo, ...
Proceedings of the National Academy of Sciences 109 (40), 16173-16178, 2012
3182012
Complex multi-enhancer contacts captured by genome architecture mapping
RA Beagrie, A Scialdone, M Schueler, DCA Kraemer, M Chotalia, SQ Xie, ...
Nature 543 (7646), 519-524, 2017
2312017
Hierarchical folding and reorganization of chromosomes are linked to transcriptional changes in cellular differentiation
J Fraser, C Ferrai, AM Chiariello, M Schueler, T Rito, G Laudanno, ...
Molecular systems biology 11 (12), 2015
1982015
Active and poised promoter states drive folding of the extended HoxB locus in mouse embryonic stem cells
M Barbieri, SQ Xie, ET Triglia, AM Chiariello, S Bianco, I de Santiago, ...
Nature structural & molecular biology 24 (6), 515, 2017
382017
A polymer model explains the complexity of large-scale chromatin folding
M Barbieri, J Fraser, LM Lavitas, M Chotalia, J Dostie, A Pombo, ...
Nucleus 4 (4), 267-273, 2013
282013
Conformation regulation of the X chromosome inactivation center: a model
A Scialdone, I Cataudella, M Barbieri, A Prisco, M Nicodemi
PLoS computational biology 7 (10), 2011
262011
A model of the large-scale organization of chromatin
M Barbieri, M Chotalia, J Fraser, LM Lavitas, J Dostie, A Pombo, ...
Biochemical Society Transactions 41 (2), 508-512, 2013
192013
Polymer physics, scaling and heterogeneity in the spatial organisation of chromosomes in the cell nucleus
M Barbieri, A Scialdone, A Gamba, A Pombo, M Nicodemi
Soft Matter 9 (36), 8631-8635, 2013
152013
Consortium F, Semple CA, Dostie J, Pombo A, Nicodemi M. Hierarchical folding and reorganization of chromosomes are linked to transcriptional changes in cellular differentiation
J Fraser, C Ferrai, AM Chiariello, M Schueler, T Rito, G Laudanno, ...
Mol Syst Biol 11 (12), 852, 2015
112015
Polymer models of chromatin organization
M Barbieri, A Scialdone, A Piccolo, AM Chiariello, C di Lanno, A Prisco, ...
Frontiers in genetics 4, 113, 2013
112013
Polymer models of the organization of chromosomes in the nucleus of cells
AM Chiariello, S Bianco, A Piccolo, C Annunziatella, M Barbieri, A Pombo, ...
Modern Physics Letters B 29 (09), 1530003, 2015
62015
Mean-field theory of the symmetry breaking model for X chromosome inactivation
A Scialdone, M Barbieri, D Pallotti, M Nicodemi
Progress of Theoretical Physics Supplement 191, 40-45, 2011
42011
Inference of chromosome 3D structures from GAM data by a physics computational approach
L Fiorillo, S Bianco, AM Chiariello, M Barbieri, A Esposito, ...
Methods, 2019
2019
Polymer Models of the Chromosomes in the Nucleus of Cells
AM Chiariello, S Bianco, A Piccolo, C Annunziatella, M Barbieri, A Pombo, ...
High Performance Scientific Computing Using Distributed Infrastructures …, 2017
2017
Statistical Mechanics Models of Chromatin Architecture
M Barbieri, M Nicodemi
2013
Sem. Cell. Dev. Biol. Sem. Cell. Dev. Biol. 14, 85, 2003
A SCIALDONE, M BARBIERI, D PALLOTTI, M NICODEMI
Progress of theoretical physics. Supplement 191, 40-45, 2011
2011
Curr. Op. Gen. Dev. Curr. Op. Gen. Dev. 17, 387, 2007
A SCIALDONE, M BARBIERI, D PALLOTTI, M NICODEMI
Progress of theoretical physics. Supplement 191, 40-45, 2011
2011
PLoS Comp. Bio. PLoS Comp. Bio. 3, e210, 2007
A SCIALDONE, M BARBIERI, D PALLOTTI, M NICODEMI
Progress of theoretical physics. Supplement 191, 40-45, 2011
2011
Statistical Physics Statistical Physics 5, 1980
A SCIALDONE, M BARBIERI, D PALLOTTI, M NICODEMI
Progress of theoretical physics. Supplement 191, 40-45, 2011
2011
STATISTICAL MECHANICS AND MOLECULAR BIOLOGY Polymer models of chromatin 3D organization
AM Chiariello, M Barbieri
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Articles 1–20