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Helena Gomes Dos Santos, PhD
Helena Gomes Dos Santos, PhD
Verified email at miami.edu
Title
Cited by
Cited by
Year
MM-ISMSA: an ultrafast and accurate scoring function for protein–protein docking
J Klett, A Nunez-Salgado, HG Dos Santos, A Cortes-Cabrera, A Perona, ...
Journal of Chemical Theory and Computation 8 (9), 3395-3408, 2012
662012
Novel HLA-B27-restricted epitopes from Chlamydia trachomatis generated upon endogenous processing of bacterial proteins suggest a role of molecular mimicry in reactive arthritis
C Alvarez-Navarro, JJ Cragnolini, HG Dos Santos, E Barnea, A Admon, ...
Journal of Biological Chemistry 288 (36), 25810-25825, 2013
592013
Protein evolution along phylogenetic histories under structurally constrained substitution models
M Arenas, HG Dos Santos, D Posada, U Bastolla
Bioinformatics 29 (23), 3020-3028, 2013
482013
The Integrator complex at the crossroad of coding and noncoding RNA
N Kirstein, HG Dos Santos, E Blumenthal, R Shiekhattar
Current opinion in cell biology 70, 37-43, 2021
412021
Targeted chemotherapy overcomes drug resistance in melanoma
J Yue, R Vendramin, F Liu, O Lopez, MG Valencia, HG Dos Santos, ...
Genes & development 34 (9-10), 637-649, 2020
292020
Integrator enforces the fidelity of transcriptional termination at protein-coding genes
LF Dasilva, E Blumenthal, F Beckedorff, PR Cingaram, ...
Science advances 7 (45), eabe3393, 2021
282021
Functional diversification after gene duplication: paralog specific regions of structural disorder and phosphorylation in p53, p63, and p73
HG Dos Santos, J Nunez-Castilla, J Siltberg-Liberles
PloS one 11 (3), e0151961, 2016
282016
Clinical responsiveness to all-trans retinoic acid is potentiated by LSD1 inhibition and associated with a quiescent transcriptome in myeloid malignancies
MM Tayari, HGD Santos, D Kwon, TJ Bradley, A Thomassen, C Chen, ...
Clinical cancer research 27 (7), 1893-1903, 2021
252021
Structure and non-structure of centrosomal proteins
HG Dos Santos, D Abia, R Janowski, G Mortuza, MG Bertero, M Boutin, ...
PLoS One 8 (5), e62633, 2013
252013
The nuanced interplay of intrinsic disorder and other structural properties driving protein evolution
J Ahrens, HG Dos Santos, J Siltberg-Liberles
Molecular biology and evolution 33 (9), 2248-2256, 2016
232016
The Integrator complex regulates microRNA abundance through RISC loading
N Kirstein, S Dokaneheifard, PR Cingaram, MG Valencia, F Beckedorff, ...
Science Advances 9 (6), eadf0597, 2023
162023
Modification of a putative third sodium site in the glycine transporter GlyT2 influences the chloride dependence of substrate transport
C Benito-Muñoz, A Perona, D Abia, HG Dos Santos, E Núñez, C Aragón, ...
Frontiers in molecular neuroscience 11, 347, 2018
152018
CRDOCK: An Ultrafast Multipurpose Protein–Ligand Docking Tool
AC Cabrera, J Klett, H G. Dos Santos, A Perona, R Gil-Redondo, ...
Journal of chemical information and modeling 52 (8), 2300-2309, 2012
142012
Characterizing conformation changes in proteins through the torsional elastic response
HG Dos Santos, J Klett, R Méndez, U Bastolla
Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics 1834 (5), 836-846, 2013
132013
Predicted dynamical couplings of protein residues characterize catalysis, transport and allostery
A Alfayate, C Rodriguez Caceres, H Gomes Dos Santos, U Bastolla
Bioinformatics 35 (23), 4971-4978, 2019
122019
An efficient microarray-based genotyping platform for the identification of drug-resistance mutations in majority and minority subpopulations of HIV-1 quasispecies
V Martín, C Perales, M Fernández-Algar, HG Dos Santos, P Garrido, ...
PLoS One 11 (12), e0166902, 2016
72016
Paralog-specific patterns of structural disorder and phosphorylation in the vertebrate SH3–SH2–tyrosine kinase protein family
HG Dos Santos, J Siltberg-Liberles
Genome biology and evolution 8 (9), 2806-2825, 2016
72016
Oxidized mC modulates synthetic lethality to PARP inhibitors for the treatment of leukemia
JP Brabson, T Leesang, YS Yap, J Wang, MQ Lam, B Fang, I Dolgalev, ...
Cell reports 42 (1), 2023
42023
BRAT1 associates with INTS11/INTS9 heterodimer to regulate key neurodevelopmental genes
S Dokaneheifard, R Shiekhattar, H Gomes Dos Santos, MG Valencia, ...
bioRxiv, 2023.08. 10.552743, 2023
2023
AMPK Downregulates Histone Gene Expression Via Dissociation of a Chromatin-Associated Transcription Complex in Response to Metabolic Stress in Acute Lymphoblastic Leukemia
GJ LeClerc, H Gomes Dos Santos, G Sun, R Shiekhattar, JC Barredo
Blood 140 (Supplement 1), 8770-8771, 2022
2022
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Articles 1–20