Statistical mechanics for natural flocks of birds W Bialek, A Cavagna, I Giardina, T Mora, E Silvestri, M Viale, AM Walczak Proceedings of the National Academy of Sciences 109 (13), 4786-4791, 2012 | 878 | 2012 |
Maximum entropy models for antibody diversity T Mora, AM Walczak, W Bialek, CG Callan Jr Proceedings of the National Academy of Sciences 107 (12), 5405-5410, 2010 | 400 | 2010 |
Statistical inference of the generation probability of T-cell receptors from sequence repertoires A Murugan, T Mora, AM Walczak, CG Callan Jr Proceedings of the National Academy of Sciences 109 (40), 16161-16166, 2012 | 331 | 2012 |
Predicting evolution M Lässig, V Mustonen, AM Walczak Nature ecology & evolution 1 (3), 0077, 2017 | 313 | 2017 |
Self-regulating gene: an exact solution JEM Hornos, D Schultz, GCP Innocentini, J Wang, AM Walczak, ... Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 72 (5 …, 2005 | 305 | 2005 |
High-throughput immune repertoire analysis with IGoR Q Marcou, T Mora, AM Walczak Nature communications 9 (1), 561, 2018 | 240 | 2018 |
Social interactions dominate speed control in poising natural flocks near criticality W Bialek, A Cavagna, I Giardina, T Mora, O Pohl, E Silvestri, M Viale, ... Proceedings of the National Academy of Sciences 111 (20), 7212-7217, 2014 | 237 | 2014 |
Inferring processes underlying B-cell repertoire diversity Y Elhanati, Z Sethna, Q Marcou, CG Callan Jr, T Mora, AM Walczak Philosophical Transactions of the Royal Society B: Biological Sciences 370 …, 2015 | 224 | 2015 |
Information transmission in genetic regulatory networks: a review G Tkačik, AM Walczak Journal of Physics: Condensed Matter 23 (15), 153102, 2011 | 213 | 2011 |
The past, present, and future of immune repertoire biology–the rise of next-generation repertoire analysis A Six, ME Mariotti-Ferrandiz, W Chaara, S Magadan, HP Pham, ... Frontiers in immunology 4, 413, 2013 | 198 | 2013 |
OLGA: fast computation of generation probabilities of B-and T-cell receptor amino acid sequences and motifs Z Sethna, Y Elhanati, CG Callan Jr, AM Walczak, T Mora Bioinformatics 35 (17), 2974-2981, 2019 | 194 | 2019 |
Live imaging of bicoid-dependent transcription in Drosophila embryos T Lucas, T Ferraro, B Roelens, JDLH Chanes, AM Walczak, M Coppey, ... Current biology 23 (21), 2135-2139, 2013 | 182 | 2013 |
Flocking and turning: a new model for self-organized collective motion A Cavagna, L Del Castello, I Giardina, T Grigera, A Jelic, S Melillo, T Mora, ... Journal of Statistical Physics 158, 601-627, 2015 | 180 | 2015 |
Optimizing information flow in small genetic networks G Tkačik, AM Walczak, W Bialek Physical Review E 80 (3), 031920, 2009 | 173 | 2009 |
Quantifying selection in immune receptor repertoires Y Elhanati, A Murugan, CG Callan Jr, T Mora, AM Walczak Proceedings of the National Academy of Sciences 111 (27), 9875-9880, 2014 | 170 | 2014 |
How a well-adapted immune system is organized A Mayer, V Balasubramanian, T Mora, AM Walczak Proceedings of the National Academy of Sciences 112 (19), 5950-5955, 2015 | 160 | 2015 |
Absolute rate theories of epigenetic stability AM Walczak, JN Onuchic, PG Wolynes Proceedings of the National Academy of Sciences 102 (52), 18926-18931, 2005 | 148 | 2005 |
Neoantigen quality predicts immunoediting in survivors of pancreatic cancer M Łuksza, ZM Sethna, LA Rojas, J Lihm, B Bravi, Y Elhanati, K Soares, ... Nature 606 (7913), 389-395, 2022 | 140 | 2022 |
Longitudinal high-throughput TCR repertoire profiling reveals the dynamics of T-cell memory formation after mild COVID-19 infection AA Minervina, EA Komech, A Titov, M Bensouda Koraichi, E Rosati, ... Elife 10, e63502, 2021 | 132 | 2021 |
Measuring the sequence-affinity landscape of antibodies with massively parallel titration curves RM Adams, T Mora, AM Walczak, JB Kinney Elife 5, e23156, 2016 | 132 | 2016 |