Denis Torre
Denis Torre
Icahn School of Medicine ad Mount Sinai
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Citata da
Citata da
Massive mining of publicly available RNA-seq data from human and mouse
A Lachmann, D Torre, AB Keenan, KM Jagodnik, HJ Lee, L Wang, ...
Nature communications 9 (1), 1-10, 2018
The library of integrated network-based cellular signatures NIH program: system-level cataloging of human cells response to perturbations
AB Keenan, SL Jenkins, KM Jagodnik, S Koplev, E He, D Torre, Z Wang, ...
Cell systems 6 (1), 13-24, 2018
Data Portal for the Library of Integrated Network-based Cellular Signatures (LINCS) program: integrated access to diverse large-scale cellular perturbation response data
A Koleti, R Terryn, V Stathias, C Chung, DJ Cooper, JP Turner, D Vidović, ...
Nucleic acids research 46 (D1), D558-D566, 2018
BioJupies: automated generation of interactive notebooks for RNA-Seq data analysis in the cloud
D Torre, A Lachmann, A Ma’ayan
Cell systems 7 (5), 556-561. e3, 2018
eXpression2Kinases (X2K) Web: linking expression signatures to upstream cell signaling networks
DJB Clarke, MV Kuleshov, BM Schilder, D Torre, ME Duffy, AB Keenan, ...
Nucleic acids research 46 (W1), W171-W179, 2018
Cell-autonomous and cell non-autonomous downregulation of tumor suppressor DAB2IP by microRNA-149-3p promotes aggressiveness of cancer cells
A Bellazzo, G Di Minin, E Valentino, D Sicari, D Torre, L Marchionni, ...
Cell Death & Differentiation 25 (7), 1224-1238, 2018
ChEA3: transcription factor enrichment analysis by orthogonal omics integration
AB Keenan, D Torre, A Lachmann, AK Leong, ML Wojciechowicz, V Utti, ...
Nucleic acids research 47 (W1), W212-W224, 2019
Sustainable data and metadata management at the BD2K-LINCS Data Coordination and Integration Center
V Stathias, A Koleti, D Vidović, DJ Cooper, KM Jagodnik, R Terryn, ...
Scientific data 5, 180117, 2018
Datasets2Tools, repository and search engine for bioinformatics datasets, tools and canned analyses
D Torre, P Krawczuk, KM Jagodnik, A Lachmann, Z Wang, L Wang, ...
Scientific data 5, 180023, 2018
Geneshot: search engine for ranking genes from arbitrary text queries
A Lachmann, BM Schilder, ML Wojciechowicz, D Torre, MV Kuleshov, ...
Nucleic acids research 47 (W1), W571-W577, 2019
FAIRshake: toolkit to evaluate the findability, accessibility, interoperability, and reusability of research digital resources
DJB Clark, L Wang, A Jones, ML Wojciechowicz, D Torre, KM Jagodnik, ...
BioRxiv, 657676, 2019
Interoperable RNA-Seq analysis in the cloud
A Lachmann, DJB Clarke, D Torre, Z Xie, A Ma'ayan
Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms, 194521, 2020
FAIRshake: Toolkit to Evaluate the FAIRness of Research Digital Resources
DJB Clarke, L Wang, A Jones, ML Wojciechowicz, D Torre, KM Jagodnik, ...
Cell systems 9 (5), 417-421, 2019
PKMYT1 is a computationally predicted target for kidney cancer
D Torre, NF Fernandez, A Ma'ayan
bioRxiv, 677245, 2019
Il sistema al momento non pu eseguire l'operazione. Riprova pi tardi.
Articoli 1–14