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Daniel P Rice
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Pervasive genetic hitchhiking and clonal interference in forty evolving yeast populations
GI Lang, DP Rice, MJ Hickman, E Sodergren, GM Weinstock, D Botstein, ...
Nature 500 (7464), 571-574, 2013
6072013
Global Epistasis Makes Adaptation Predictable Despite Sequence-Level Stochasticity
S Kryazhimskiy, DP Rice, E Jerison, MM Desai
Science 344 (6191), 1519-1522, 2014
4342014
Sex speeds adaptation by altering the dynamics of molecular evolution
MJ McDonald, DP Rice, MM Desai
Nature 531 (7593), 233-236, 2016
3512016
Adaptive evolution of genomically recoded Escherichia coli
TM Wannier, AM Kunjapur, DP Rice, MJ McDonald, MM Desai, ...
Proceedings of the National Academy of Sciences 115 (12), 3090-3095, 2018
912018
Gene expression evolves under a house-of-cards model of stabilizing selection
A Hodgins-Davis, DP Rice, JP Townsend
Molecular Biology and Evolution 32 (8), 2130-2140, 2015
752015
Population Subdivision and Adaptation in Asexual Populations of Saccharomyces cerevisiae
S Kryazhimskiy, DP Rice, MM Desai
Evolution, 2012
632012
A genomic and evolutionary approach reveals non-genetic drug resistance in malaria
JD Herman, DP Rice, U Ribacke, J Silterra, AA Deik, EL Moss, ...
Genome biology 15, 511, 2014
442014
The evolutionarily stable distribution of fitness effects
DP Rice, BH Good, MM Desai
Genetics 200 (1), 321-329, 2015
412015
A variant-centric perspective on geographic patterns of human allele frequency variation
A Biddanda, DP Rice, J Novembre
Elife 9, e60107, 2020
342020
A test for selection employing quantitative trait locus and mutation accumulation data
DP Rice, JP Townsend
Genetics 190 (4), 1533-1545, 2012
212012
Resampling QTL effects in the QTL sign test leads to incongruous sensitivity to variance in effect size
DP Rice, JP Townsend
G3: Genes| Genomes| Genetics 2 (8), 905-911, 2012
102012
Distinguishing multiple-merger from Kingman coalescence using two-site frequency spectra
DP Rice, J Novembre, MM Desai
bioRxiv, 461517, 2018
92018
Polygenic score accuracy in ancient samples: quantifying the effects of allelic turnover
MO Carlson, DP Rice, JJ Berg, M Steinrücken
PLoS Genetics 18 (5), e1010170, 2022
62022
Geographic patterns of human allele frequency variation: a variant-centric perspective
A Biddanda, DP Rice, J Novembre
BioRxiv, 2020.07. 01.182311, 2020
22020
Inferring the sensitivity of wastewater metagenomic sequencing for pathogen early detection
SL Grimm, JT Kaufman, DP Rice, C Whittaker, WJ Bradshaw, ...
medRxiv, 2023.12. 22.23300450, 2023
2023
Virus-like DNA tracers for characterizing wastewater-based pathogen monitoring systems
A Gopal, AN Machtinger, B Wang, DP Rice, MR McLaren, KM Esvelt
bioRxiv, 2023.12. 24.573197, 2023
2023
S1 Text. Extended model, methods, and results for
MO Carlson, DP Rice, JJ Berg, M Steinrücken
2022
Long-Term Adaptive Evolution of Amberless Escherichia coli strains Reveals Selective Mutations in Translation Machinery
A Kunjapur, TM Wannier, D Rice, M McDonald, MM Desai, G Church
2017 AIChE Annual Meeting, 2017
2017
Statistics and Dynamics of Adaptation from de novo Mutations
DP Rice
Harvard University, 2017
2017
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Articles 1–19