Venkata Krishnan Ramaswamy

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Paolo RuggeroneFull Professor of Applied Physics, University of CagliariEmail verificata su dsf.unica.it
Attilio Vittorio VargiuAssociate Professor of Applied Physics, Physics Department, University of Cagliari, ITALYEmail verificata su dsf.unica.it
Giuliano MallociDepartment of Physics - University of CagliariEmail verificata su dsf.unica.it
Enzo TramontanoProfessore Ordinario di Microbiologia, Dipartimento di Scienze della Vita e dell'Ambiente, Università di CagliariEmail verificata su unica.it
Angela CoronaAssociated Professor, Università di CagliariEmail verificata su unica.it
Francesco Di PalmaIstituto Italiano di TecnologiaEmail verificata su iit.it
Matteo DegiacomiAssociate Professor, Durham UniversityEmail verificata su durham.ac.uk
Alessio AtzoriUniversità degli Studi di CagliariEmail verificata su dsf.unica.it
Ulrich KleinekathöferProfessor of Theoretical Physics, Constructor UniversityEmail verificata su constructor.university
Chris G. WillcocksAssociate Professor, Durham UniversityEmail verificata su durham.ac.uk
Eitan BibiWeizmann Institute of ScienceEmail verificata su weizmann.ac.il
Klaas Martinus PosProfessor Membrane Transport MachineriesEmail verificata su em.uni-frankfurt.de
Josh HortonUniversity of Newcastle PhDEmail verificata su newcastle.ac.uk
David L. DotsonDatryllic LLCEmail verificata su datryllic.com
Joshua A. MitchellOpen Molecular Software FoundationEmail verificata su anu.edu.au
Simon BoothroydGenesis TherapeuticsEmail verificata su genesistherapeutics.ai
Jeffrey R WagnerSoftware Scientist, Open Force Field InitiativeEmail verificata su ucsd.edu
Daniel J ColeNewcastle UniversityEmail verificata su ncl.ac.uk
Trevor GokeyUC IrvineEmail verificata su uci.edu
David MobleyProfessor, University of California, IrvineEmail verificata su uci.edu

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Venkata Krishnan Ramaswamy

Computational Chemistry Developer at Cresset software and discovery

Email verificata su cresset-group.com

Protein dynamics Molecular modelling Molecular Dynamics Simulations Computational Drug Design Deep learning


Titolo Ordina per citazioni Ordina per anno Ordina per titolo	Citata da Citata da	Anno
Molecular Rationale behind the Differential Substrate Specificity of Bacterial RND Multi-Drug Transporters VK Ramaswamy, AV Vargiu, G Malloci, J Dreier, P Ruggerone Scientific Reports, 2017	77	2017
Water-mediated interactions enable smooth substrate transport in a bacterial efflux pump AV Vargiu, VK Ramaswamy, I Malvacio, G Malloci, U Kleinekathöfer, ... Biochimica et Biophysica Acta (BBA)-General Subjects 1862 (4), 836-845, 2018	51	2018
Molecular determinants of the promiscuity of MexB and MexY multidrug transporters of Pseudomonas aeruginosa VK Ramaswamy, AV Vargiu, G Malloci, J Dreier, P Ruggerone Frontiers in Microbiology 9, 1144, 2018	42	2018
Computer simulations of the activity of RND efflux pumps AV Vargiu, VK Ramaswamy, G Malloci, I Malvacio, A Atzori, P Ruggerone Research in microbiology 169 (7-8), 384-392, 2018	41	2018
Deep Learning Protein Conformational Space with Convolutions and Latent Interpolations VK Ramaswamy, SC Musson, CG Willcocks, MT Degiacomi Physical Review X 11 (1), 011052, 2021	39	2021
Computational modelling of efflux pumps and their inhibitors VK Ramaswamy, P Cacciotto, G Malloci, AV Vargiu, P Ruggerone Essays in biochemistry 61 (1), 141-156, 2017	38	2017
A New Critical Conformational Determinant of Multidrug Efflux by an MFS Transporter E Zomot, EH Yardeni, AV Vargiu, HK Tam, G Malloci, VK Ramaswamy, ... Journal of molecular biology 430 (9), 1368-1385, 2018	37	2018
Open Force Field BespokeFit: Automating Bespoke Torsion Parametrization At Scale JT Horton, S Boothroyd, J Wagner, JA Mitchell, T Gokey, DL Dotson, ... Journal of Chemical Information and Modeling 62 (22), 5622-5633, 2022	34	2022
Assessing therapeutic potential of molecules: molecular property diagnostic suite for tuberculosis (MPDS TB) AS Gaur, A Bhardwaj, A Sharma, L John, MR Vivek, N Tripathi, ... Journal of Chemical Sciences 129 (5), 515-531, 2017	21	2017
Insights into the homo-oligomerization properties of N-terminal coiled-coil domain of Ebola virus VP35 protein VK Ramaswamy, F Di Palma, AV Vargiu, A Corona, D Piano, ... Virus research 247, 61-70, 2018	19	2018
Relevance of Ebola virus VP35 homo-dimerization on the type I interferon cascade inhibition F Di Palma, GL Daino, VK Ramaswamy, A Corona, A Frau, E Fanunza, ... Antiviral Chemistry and Chemotherapy 27, 2040206619889220, 2019	17	2019
Multidrug efflux pumps and their inhibitors characterized by computational modeling VK Ramaswamy, P Cacciotto, G Malloci, P Ruggerone, AV Vargiu Efflux-mediated antimicrobial resistance in bacteria: Mechanisms, regulation …, 2016	17	2016
Molecular Modeling of Multidrug Properties of Resistance Nodulation Division (RND) Transporters P Cacciotto, VK Ramaswamy, G Malloci, P Ruggerone, AV Vargiu Bacterial Multidrug Exporters, Methods in Molecular Biology 1700, 179-219, 2018	9	2018
Allophycocyanin A is a carbon dioxide receptor in the cyanobacterial phycobilisome A Guillén-García, SER Gibson, CJC Jordan, VK Ramaswamy, ... Nature Communications 13 (1), 5289, 2022	7	2022
Structure based de novo design of IspD inhibitors as anti-tubercular agents RA Varikoti, RP Gangwal, GV Dhoke, VK Ramaswamy, AT Sangamwar Available from Nature Precedings <http://dx.doi.org/10.1038/npre.2012.7088.1> 1, 2012	5	2012
Common recognition topology of mex transporters of Pseudomonas aeruginosa revealed by molecular modelling A Catte, V K. Ramaswamy, AV Vargiu, G Malloci, A Bosin, P Ruggerone Frontiers in Pharmacology 13, 1021916, 2022	4	2022
Learning protein conformational space by enforcing physics with convolutions and latent interpolations VK Ramaswamy, CG Willcocks, MT Degiacomi arXiv preprint arXiv:1910.04543, 2019		2019
Water-mediated interactions enable smooth substrate transport in a bacterial efflux pump General subjects AV Vargiu, VK Ramaswamy, I Malvacio, G Malloci, U Kleinekathöfer, ...		2018
Insights into Ebola VP35 oligomerization from molecular simulations F Di Palma, VK Ramaswamy, G Daino, A Frau, A Corona, L Zinzula, ... ABSTRACTS OF PAPERS-AMERICAN CHEMICAL SOCIETY 255, 2018		2018
Molecular Rationale Behind the Differential Substrate Specificity of Homologous RND Transporters in E. coli and P. aeruginosa VK Ramaswamy Università degli Studi di Cagliari, 2017		2017

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