Alfonso Valencia

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Martin Krallinger*Head of Text Mining Unit, Barcelona Supercomputing Center (BSC-CNS)Verified email at bsc.es
David JuanInstitut de Biologia Evolutiva (UPF-CSIC)Verified email at upf.edu
Chris SanderDana-Farber Cancer Institute, Harvard Medical School, Broad Institute, Memorial Sloan KetteringVerified email at sanderlab.org
Florian LeitnerData Catalytics SL, ION Analytics, IE UniversityVerified email at datacatalytics.com
Christos Α. OuzounisAUTH, Thessalonica, Greece • CERTH, Thessalonica, GreeceVerified email at csd.auth.gr
Miguel VazquezBarcelona Supercomputing Center - Spanish National HPCVerified email at bsc.es
Luis Sanchez-PulidoSenior Investigator Scientist IGMM HG-MRC University of EdinburghVerified email at ed.ac.uk
Iakes EzkurdiaSpanish National Cardiovascular Research Center CNICVerified email at cnic.es
Ana M Rojas-Mendoza (0000-0003-07...Group Leader, Bioinformatics and Computational Biology, Centro Andaluz de Biología del DesarrolloVerified email at upo.es
Miguel AndradeJohannes-Gutenberg University in MainzVerified email at uni-mainz.de
Peer BorkEMBLVerified email at embl.de
Daniel RicoBiosciences InstituteVerified email at newcastle.ac.uk
Tirso PonsCNB-CSIC, MadridVerified email at cnb.csic.es
Burkhard RostProfessor of Computer Science & Computational Biology & Bioinformatics, TUM, MunichVerified email at tum.de
ENRIQUE CARRILLO DE SANTA PAU...IMDEA Food InstituteVerified email at imdea.org
Vera PancaldiCentre de Recherches en Cancérologie de Toulouse (Inserm) & Université Toulouse III Paul SabatierVerified email at inserm.fr
Jose RodriguezCardiovascular Proteomics, Spanish National Center for Cardiovascular Research (CNIC)Verified email at cnic.es
Joaquin DopazoHead of the Clinical Bioinformatics Area, FPS, Hospital Virgen del Rocio, Sevilla, SpainVerified email at juntadeandalucia.es
Federico AbascalCancer, Aging and Somatic Mutation, Wellcome Sanger InstituteVerified email at sanger.ac.uk
Anaïs BaudotCNRS - Inserm - AMUVerified email at univ-amu.fr

Alfonso Valencia

ICREA Professor. Barcelona Supercomputing Center.

Verified email at bsc.es - Homepage

computational biology bioinformatics cancer genomics text mining protein evolution.


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
An integrated encyclopedia of DNA elements in the human genome ENCODE Project Consortium Nature 489 (7414), 57, 2012	12534	2012
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project ENCODE Project Consortium nature 447 (7146), 799, 2007	5470	2007
GENCODE: the reference human genome annotation for The ENCODE Project J Harrow, A Frankish, JM Gonzalez, E Tapanari, M Diekhans, ... Genome research 22 (9), 1760-1774, 2012	4236	2012
International network of cancer genome projects International Cancer Genome Consortium Nature 464 (7291), 993, 2010	1839	2010
Whole-genome sequencing identifies recurrent mutations in chronic lymphocytic leukaemia XS Puente, M Pinyol, V Quesada, L Conde, GR Ordóñez, N Villamor, ... Nature 475 (7354), 101-105, 2011	1641	2011
A user's guide to the encyclopedia of DNA elements (ENCODE) RM Myers, J Stamatoyannopoulos, M Snyder, I Dunham, RC Hardison, ... PLoS Biology 9 (4), e1001046, 2011	1266	2011
Exome sequencing identifies recurrent mutations of the splicing factor SF3B1 gene in chronic lymphocytic leukemia V Quesada, L Conde, N Villamor, GR Ordóñez, P Jares, L Bassaganyas, ... Nature genetics 44 (1), 47-52, 2012	1060	2012
IntAct: an open source molecular interaction database H Hermjakob, L Montecchi‐Palazzi, C Lewington, S Mudali, S Kerrien, ... Nucleic acids research 32 (suppl_1), D452-D455, 2004	1026	2004
An ATPase domain common to prokaryotic cell cycle proteins, sugar kinases, actin, and hsp70 heat shock proteins. P Bork, C Sander, A Valencia Proceedings of the National Academy of Sciences 89 (16), 7290-7294, 1992	1025	1992
Correlated mutations and residue contacts in proteins U Göbel, C Sander, R Schneider, A Valencia Proteins: Structure, Function, and Bioinformatics 18 (4), 309-317, 1994	969	1994
A hierarchical unsupervised growing neural network for clustering gene expression patterns J Herrero, A Valencia, J Dopazo Bioinformatics 17 (2), 126-136, 2001	764	2001
Non-coding recurrent mutations in chronic lymphocytic leukaemia XS Puente, S Beà, R Valdés-Mas, N Villamor, J Gutiérrez-Abril, ... Nature 526 (7574), 519-524, 2015	740	2015
The allelic landscape of human blood cell trait variation and links to common complex disease WJ Astle, H Elding, T Jiang, D Allen, D Ruklisa, AL Mann, D Mead, ... Cell 167 (5), 1415-1429. e19, 2016	737	2016
The ras protein family: evolutionary tree and role of conserved amino acids A Valencia, P Chardin, A Wittinghofer, C Sander Biochemistry 30 (19), 4637-4648, 1991	718	1991
Distinct DNA methylomes of newborns and centenarians H Heyn, N Li, HJ Ferreira, S Moran, DG Pisano, A Gomez, J Diez, ... Proceedings of the National Academy of Sciences 109 (26), 10522-10527, 2012	706	2012
Correlated mutations contain information about protein-protein interaction F Pazos, M Helmer-Citterich, G Ausiello, A Valencia Journal of molecular biology 271 (4), 511-523, 1997	658	1997
Multiple evidence strands suggest that there may be as few as 19 000 human protein-coding genes I Ezkurdia, D Juan, JM Rodriguez, A Frankish, M Diekhans, J Harrow, ... Human molecular genetics 23 (22), 5866-5878, 2014	643	2014
Automatic extraction of biological information from scientific text: protein-protein interactions. C Blaschke, MA Andrade, CA Ouzounis, A Valencia Ismb 7, 60-67, 1999	639	1999
Similarity of phylogenetic trees as indicator of protein–protein interaction F Pazos, A Valencia Protein engineering 14 (9), 609-614, 2001	628	2001
A gene network for navigating the literature R Hoffmann, A Valencia Nature genetics 36 (7), 664-664, 2004	626	2004

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