| Dissipative particle dynamics study of spontaneous vesicle formation of amphiphilic molecules S Yamamoto, Y Maruyama, S Hyodo The Journal of chemical physics 116 (13), 5842-5849, 2002 | 463 | 2002 |
| Selective ion-binding by protein probed with the 3D-RISM theory N Yoshida, S Phongphanphanee, Y Maruyama, T Imai, F Hirata Journal of the American Chemical Society 128 (37), 12042-12043, 2006 | 128 | 2006 |
| Gaussian–Markovian quantum Fokker–Planck approach to nonlinear spectroscopy of a displaced Morse potentials system: Dissociation, predissociation, and optical Stark effects Y Tanimura, Y Maruyama The Journal of chemical physics 107 (6), 1779-1793, 1997 | 89 | 1997 |
| Theoretical study of CO escaping pathway in myoglobin with the 3D-RISM theory Y Kiyota, R Hiraoka, N Yoshida, Y Maruyama, T Imai, F Hirata Journal of the American Chemical Society 131 (11), 3852-3853, 2009 | 69 | 2009 |
| Modified Anderson method for accelerating 3D-RISM calculations using graphics processing unit Y Maruyama, F Hirata Journal of Chemical Theory and Computation 8 (9), 3015-3021, 2012 | 45 | 2012 |
| Preliminary performance evaluation of the Fujitsu A64FX using HPC applications T Odajima, Y Kodama, M Tsuji, M Matsuda, Y Maruyama, M Sato 2020 IEEE international conference on cluster computing (cluster), 523-530, 2020 | 43 | 2020 |
| Massively parallel implementation of 3D‐RISM calculation with volumetric 3D‐FFT Y Maruyama, N Yoshida, H Tadano, D Takahashi, M Sato, F Hirata Journal of Computational Chemistry 35 (18), 1347-1355, 2014 | 40 | 2014 |
| Does water drive protein folding? Y Maruyama, Y Harano Chemical Physics Letters 581, 85-90, 2013 | 37 | 2013 |
| Revisiting the salt-induced conformational change of DNA with 3D-RISM theory Y Maruyama, N Yoshida, F Hirata The journal of physical chemistry B 114 (19), 6464-6471, 2010 | 35 | 2010 |
| Comparison of DNA hydration patterns obtained using two distinct computational methods, molecular dynamics simulation and three-dimensional reference interaction site model theory Y Yonetani, Y Maruyama, F Hirata, H Kono The Journal of chemical physics 128 (18), 2008 | 35 | 2008 |
| High performance 3-D FFT using multiple CUDA GPUs A Nukada, Y Maruyama, S Matsuoka Proceedings of the 5th Annual Workshop on General Purpose Processing with …, 2012 | 32 | 2012 |
| A solvation‐free‐energy functional: A reference‐modified density functional formulation T Sumi, A Mitsutake, Y Maruyama Journal of computational chemistry 36 (18), 1359-1369, 2015 | 30 | 2015 |
| Stability of unfolded and folded protein structures using a 3D-RISM with the RMDFT Y Maruyama, A Mitsutake The Journal of Physical Chemistry B 121 (42), 9881-9885, 2017 | 27 | 2017 |
| Solvent and salt effects on structural stability of human telomere Y Maruyama, T Matsushita, R Ueoka, F Hirata The Journal of Physical Chemistry B 115 (10), 2408-2416, 2011 | 26 | 2011 |
| Pump-probe spectra and nuclear dynamics for a dissipative molecular system in a strong laser field: predissociation dynamics Y Maruyama, Y Tanimura Chemical physics letters 292 (1-2), 28-34, 1998 | 20 | 1998 |
| Analysis of protein folding simulation with moving root mean square deviation Y Maruyama, R Igarashi, Y Ushiku, A Mitsutake Journal of Chemical Information and Modeling 63 (5), 1529-1541, 2023 | 17 | 2023 |
| Probing cations recognized by a crown ether with the 3D-RISM theory Y Ikuta, Y Maruyama, M Matsugami, F Hirata Chemical physics letters 433 (4-6), 403-408, 2007 | 17 | 2007 |
| Simulations of below-ground dynamics of fungi: 1.184 pflops attained by automated generation and autotuning of temporal blocking codes T Muranushi, H Hotta, J Makino, S Nishizawa, H Tomita, K Nitadori, ... SC'16: Proceedings of the International Conference for High Performance …, 2016 | 16 | 2016 |
| Automatic generation of efficient codes from mathematical descriptions of stencil computation T Muranushi, S Nishizawa, H Tomita, K Nitadori, M Iwasawa, Y Maruyama, ... Proceedings of the 5th International Workshop on Functional High-Performance …, 2016 | 16 | 2016 |
| Electrolytes in biomolecular systems studied with the 3D-RISM/RISM theory Y Maruyama, N Yoshida, F Hirata Interdisciplinary Sciences: Computational Life Sciences 3, 290-307, 2011 | 16 | 2011 |
Norio YOSHIDAProfessor, Graduate School of Informatics, Nagoya UniversityVerified email at nagoya-u.jp
