An integrated encyclopedia of DNA elements in the human genome ENCODE Project Consortium Nature 489 (7414), 57, 2012 | 17480 | 2012 |
Initial sequencing and comparative analysis of the mouse genome European Bioinformatics Institute: Birney Ewan 3 Goldman Nick 3 Kasprzyk ... Nature 420 (6915), 520-562, 2002 | 8776 | 2002 |
Galaxy: a platform for interactive large-scale genome analysis B Giardine, C Riemer, RC Hardison, R Burhans, L Elnitski, P Shah, ... Genome research 15 (10), 1451-1455, 2005 | 2619 | 2005 |
Genome sequence of the Brown Norway rat yields insights into mammalian evolution University of Utah Weiss Robert B. 14 Dunn Diane M. 14, ... Nature 428 (6982), 493-521, 2004 | 2593 | 2004 |
The ENCODE (ENCyclopedia of DNA elements) project EA Feingold, PJ Good, MS Guyer, S Kamholz, L Liefer, K Wetterstrand, ... Science 306 (5696), 636-640, 2004 | 2460 | 2004 |
Aligning multiple genomic sequences with the threaded blockset aligner M Blanchette, WJ Kent, C Riemer, L Elnitski, AFA Smit, KM Roskin, ... Genome research 14 (4), 708-715, 2004 | 2242 | 2004 |
The genome sequence of taurine cattle: a window to ruminant biology and evolution Bovine Genome Sequencing and Analysis Consortium, CG Elsik, ... Science 324 (5926), 522-528, 2009 | 1167 | 2009 |
Defining functional DNA elements in the human genome M Kellis, B Wold, MP Snyder, BE Bernstein, A Kundaje, GK Marinov, ... Proceedings of the National Academy of Sciences 111 (17), 6131-6138, 2014 | 901 | 2014 |
Comparative analyses of multi-species sequences from targeted genomic regions JW Thomas, JW Touchman, RW Blakesley, GG Bouffard, ... Nature 424 (6950), 788-793, 2003 | 791 | 2003 |
A user's guide to the encyclopedia of DNA elements (ENCODE) RM Myers, J Stamatoyannopoulos, M Snyder, I Dunham, RC Hardison, ... PLoS biology 9 (4), 2011 | 688 | 2011 |
Covariation in frequencies of substitution, deletion, transposition, and recombination during eutherian evolution RC Hardison, KM Roskin, S Yang, M Diekhans, WJ Kent, R Weber, ... Genome research 13 (1), 13-26, 2003 | 362 | 2003 |
Cross-species sequence comparisons: a review of methods and available resources KA Frazer, L Elnitski, DM Church, I Dubchak, RC Hardison Genome Research 13 (1), 1-12, 2003 | 335 | 2003 |
The genome sequence of taurine cattle: a window to ruminant biology and evolution TBG Sequencing, CG Elsik, RL Tellam, KC Worley, Analysis Consortium Science (New York, NY) 324 (5926), 522, 2009 | 303 | 2009 |
Locating mammalian transcription factor binding sites: a survey of computational and experimental techniques L Elnitski, VX Jin, PJ Farnham, SJM Jones Genome research 16 (12), 1455-1464, 2006 | 293 | 2006 |
MultiPipMaker and supporting tools: Alignments and analysis of multiple genomic DNA sequences S Schwartz, L Elnitski, M Li, M Weirauch, C Riemer, A Smit, NCS Program, ... Nucleic acids research 31 (13), 3518-3524, 2003 | 276 | 2003 |
Evaluation of regulatory potential and conservation scores for detecting cis-regulatory modules in aligned mammalian genome sequences DC King, J Taylor, L Elnitski, F Chiaromonte, W Miller, RC Hardison Genome research 15 (8), 1051-1060, 2005 | 258 | 2005 |
Whole-genome sequencing identifies a recurrent functional synonymous mutation in melanoma JJ Gartner, SCJ Parker, TD Prickett, K Dutton-Regester, ML Stitzel, JC Lin, ... Proceedings of the National Academy of Sciences 110 (33), 13481-13486, 2013 | 200 | 2013 |
Distinguishing regulatory DNA from neutral sites L Elnitski, RC Hardison, J Li, S Yang, D Kolbe, P Eswara, MJ O'Connor, ... Genome Research 13 (1), 64-72, 2003 | 174 | 2003 |
The genome sequence of taurine cattle: a window to ruminant biology and evolution. S Bovine Genome, CG Elsik, RL Tellam, KC Worley, RA Gibbs, DM Muzny, ... Science 324 (5926), 522-528, 2009 | 162 | 2009 |
Regulatory potential scores from genome-wide three-way alignments of human, mouse, and rat D Kolbe, J Taylor, L Elnitski, P Eswara, J Li, W Miller, R Hardison, ... Genome research 14 (4), 700-707, 2004 | 142 | 2004 |