|Editing DNA methylation in the mammalian genome|
XS Liu, H Wu, X Ji, Y Stelzer, X Wu, S Czauderna, J Shu, D Dadon, ...
Cell 167 (1), 233-247. e17, 2016
|Induction of pluripotency in mouse somatic cells with lineage specifiers|
J Shu, C Wu, Y Wu, Z Li, S Shao, W Zhao, X Tang, H Yang, L Shen, X Zuo, ...
Cell 153 (5), 963-975, 2013
|Human hepatocytes with drug metabolic function induced from fibroblasts by lineage reprogramming|
Y Du, J Wang, J Jia, N Song, C Xiang, J Xu, Z Hou, X Su, B Liu, T Jiang, ...
Cell stem cell 14 (3), 394-403, 2014
|Optimal-transport analysis of single-cell gene expression identifies developmental trajectories in reprogramming|
G Schiebinger*, J Shu*+, M Tabaka*, B Cleary*, V Subramanian, ...
Cell 176 (4), 928-943. e22, 2019
|Integrated analyses of single-cell atlases reveal age, gender, and smoking status associations with cell type-specific expression of mediators of SARS-CoV-2 viral entry and …|
P Barbry, C Muus, M Luecken, G Eraslan, A Waghray, G Heimberg, ...
|Reconstruction of developmental landscapes by optimal-transport analysis of single-cell gene expression sheds light on cellular reprogramming|
G Schiebinger, J Shu, M Tabaka, B Cleary, V Subramanian, A Solomon, ...
BioRxiv, 191056, 2017
|GATA family members as inducers for cellular reprogramming to pluripotency|
J Shu, K Zhang, M Zhang, A Yao, S Shao, F Du, C Yang, W Chen, C Wu, ...
Cell research 25 (2), 169-180, 2015
|Human iPSC-derived microglia assume a primary microglia-like state after transplantation into the neonatal mouse brain|
DS Svoboda, MI Barrasa, J Shu, R Rietjens, S Zhang, M Mitalipova, ...
Proceedings of the National Academy of Sciences 116 (50), 25293-25303, 2019
|Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics|
C Muus, MD Luecken, G Eraslan, L Sikkema, A Waghray, G Heimberg, ...
Nature medicine 27 (3), 546-559, 2021
|Lineage specifiers: new players in the induction of pluripotency|
J Shu, H Deng
Genomics, proteomics & bioinformatics 11 (5), 259-263, 2013
|ClusterMap: multi-scale clustering analysis of spatial gene expression|
Y He, X Tang, J Huang, H Zhou, K Chen, A Liu, J Ren, H Shi, Z Lin, Q Li, ...
|Commentary on the Truncated Splice Variant of the GM-CSF Receptor Beta-Chain in Peripheral Blood Serves as Severity Biomarker of Respiratory Failure in Newborns|
JA Whitsett, AH Jobe
Neonatology 118 (2), 194-197, 2021
|Methods and systems for reconstruction of developmental landscapes by optimal transport analysis|
G Schiebinger, J Shu, M Tabaka, B Cleary, A Regev, ES Lander, ...
US Patent App. 16/648,715, 2020