Autism-associated mutation in Hevin/Sparcl1 induces endoplasmic reticulum stress through structural instability T Taketomi, T Yasuda, R Morita, J Kim, Y Shigeta, C Eroglu, R Harada, ... Scientific Reports 12 (1), 11891, 2022 | 9 | 2022 |
Cell cycle-dependent phosphorylation of IQGAP is involved in assembly and stability of the contractile ring in fission yeast R Morita, O Numata, K Nakano, M Takaine Biochemical and Biophysical Research Communications 534, 1026-1032, 2021 | 8 | 2021 |
Free-Energy Profiles for Membrane Permeation of Compounds Calculated Using Rare-Event Sampling Methods R Harada, R Morita, Y Shigeta Journal of Chemical Information and Modeling 63 (1), 259-269, 2022 | 7 | 2022 |
Structural Validation by the G-Factor Properly Regulates Boost Potentials Imposed in Conformational Sampling of Proteins T Yasuda, R Morita, Y Shigeta, R Harada Journal of Chemical Information and Modeling 62 (14), 3442-3452, 2022 | 4 | 2022 |
Independent Nontargeted Parallel Cascade Selection Molecular Dynamics (Ino-PaCS-MD) to Enhance the Conformational Sampling of Proteins T Yasuda, R Morita, Y Shigeta, R Harada Journal of Chemical Theory and Computation 17 (9), 5933-5943, 2021 | 4 | 2021 |
Molecular Mechanism for the Actin-Binding Domain of α-Actinin Ain1 Elucidated by Molecular Dynamics Simulations and Mutagenesis Experiments R Morita, K Nakano, Y Shigeta, R Harada The Journal of Physical Chemistry B 124 (39), 8495-8503, 2020 | 3 | 2020 |
Molecular dissection of the actin-binding ability of the fission yeast α-actinin, Ain1, in vitro and in vivo R Morita, M Takaine, O Numata, K Nakano The journal of biochemistry 162 (2), 93-102, 2017 | 3 | 2017 |
Efficient screening of protein-ligand complexes in lipid bilayers using LoCoMock score R Morita, Y Shigeta, R Harada Journal of Computer-Aided Molecular Design 37 (4), 217-225, 2023 | 2 | 2023 |
Identifying antibiotics based on structural differences in the conserved allostery from mitochondrial heme-copper oxidases Y Nishida, S Yanagisawa, R Morita, H Shigematsu, K Shinzawa-Itoh, ... nature communications 13 (1), 7591, 2022 | 2 | 2022 |
Phosphorylation in the accessory domain of yeast histone chaperone protein 1 exposes the nuclear export signal sequence S Ashida, R Morita, Y Shigeta, R Harada Proteins: Structure, Function, and Bioinformatics 90 (2), 317-321, 2022 | 2 | 2022 |
Integrated In Silico Studies on the Role of Nicotinamide Adenine Dinucleotide (NADH) Binding in Activating C-Terminal Binding Protein 2 (CtBP2) T Aoyagi, R Yoshino, Y Mitsuta, R Morita, R Harada, Y Shigeta Chemistry Letters 51 (1), 1-4, 2022 | 2 | 2022 |
A post-process to estimate an approximated minimal free energy path based on local centroids R Morita, Y Shigeta, R Harada Chemical Physics Letters 782, 139003, 2021 | 2 | 2021 |
Protein Structure Validation Derives a Smart Conformational Search in a Physically Relevant Configurational Subspace T Yasuda, R Morita, Y Shigeta, R Harada Journal of Chemical Information and Modeling 62 (23), 6217-6227, 2022 | 1 | 2022 |
Histone H3 Inhibits Ubiquitin-Ubiquitin Intermolecular Interactions to Enhance Binding to DNA Methyl Transferase 1 T Yasuda, R Morita, Y Shigeta, R Harada Journal of molecular biology 434 (2), 167371, 2022 | 1 | 2022 |
Structural Variations of Metallothionein with or without Zinc Ions Elucidated by All-Atom Molecular Dynamics Simulations R Morita, Y Shigeta, R Harada The Journal of Physical Chemistry B 125 (46), 12712-12717, 2021 | 1 | 2021 |
Comprehensive predictions of secondary structures for comparative analysis in different species Rikuri Morita, Yasuteru Shigeta, Ryuhei Harada Journal of Structural Biology 213 (2), 107735, 2021 | 1 | 2021 |
Rearrangements of Water Molecules in Parallel Cascade Selection Molecular Dynamics Enhance Structural Explorations of Proteins R Morita, Y Shigeta, R Harada Bulletin of the Chemical Society of Japan 94 (1), 97-105, 2021 | 1 | 2021 |
Pathological mutations promote proteolysis of mitochondrial tRNA-specific 2-thiouridylase 1 (MTU1) via mitochondrial caseinolytic peptidase (CLPP) RNR Ahmad, LT Zhang, R Morita, H Tani, Y Wu, T Chujo, A Ogawa, ... Nucleic Acids Research 52 (3), 1341-1358, 2024 | | 2024 |
Latrunculin resistance mechanism of non‐conventional actin NAP1 uncovered by molecular dynamics simulations R Morita, Y Shigeta, R Harada Cytoskeleton 81 (2-3), 143-150, 2024 | | 2024 |
Yeast PRPP amidotransferase assembles into fine granules to promote de novo purine synthesis through intermolecular substrate channeling M Takaine, R Morita bioRxiv, 2023.06. 05.543815, 2023 | | 2023 |