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Adrián A. Davín
Adrián A. Davín
Postdoctoral fellow
Verified email at uq.edu.au
Title
Cited by
Cited by
Year
A standardized archaeal taxonomy for the Genome Taxonomy Database
C Rinke, M Chuvochina, AJ Mussig, PA Chaumeil, AA Davín, DW Waite, ...
Nature microbiology 6 (7), 946-959, 2021
2042021
A rooted phylogeny resolves early bacterial evolution
GA Coleman, AA Davín, TA Mahendrarajah, LL Szánthó, A Spang, ...
Science 372 (6542), eabe0511, 2021
1342021
Genome-scale phylogenetic analysis finds extensive gene transfer among fungi
GJ Szöllősi, AA Davín, E Tannier, V Daubin, B Boussau
Philosophical Transactions of the Royal Society B: Biological Sciences 370 …, 2015
882015
Gene transfers can date the tree of life
AA Davín, E Tannier, TA Williams, B Boussau, V Daubin, GJ Szöllősi
Nature ecology & evolution 2 (5), 904-909, 2018
602018
Zombi: a phylogenetic simulator of trees, genomes and sequences that accounts for dead linages
AA Davín, T Tricou, E Tannier, DM de Vienne, GJ Szöllősi
Bioinformatics 36 (4), 1286-1288, 2020
292020
RecPhyloXML: a format for reconciled gene trees
W Duchemin, G Gence, AM Arigon Chifolleau, L Arvestad, MS Bansal, ...
Bioinformatics 34 (21), 3646-3652, 2018
212018
MaxTiC: Fast ranking of a phylogenetic tree by Maximum Time Consistency with lateral gene transfers
C Chauve, A Rafiey, AA Davin, C Scornavacca, P Veber, B Boussau, ...
bioRxiv, 127548, 2017
122017
A rooted phylogeny resolves early bacterial evolution. Science 372: eabe0511
GA Coleman, AA Davín, TA Mahendrarajah, LL Szánthó, A Spang, ...
82021
ATP synthase evolution on a cross-braced dated tree of life
TA Mahendrarajah, ERR Moody, D Schrempf, LL Szánthó, N Dombrowski, ...
Nature Communications 14 (1), 7456, 2023
62023
Resolving widespread incomplete and uneven archaeal classifications based on a rank-normalized genome-based taxonomy
C Rinke, M Chuvochina, AJ Mussig, PA Chaumeil, AA Davin, DW Waite, ...
bioRxiv, 2020.03. 01.972265, 2020
62020
Zombi: A simulator of species, genes and genomes that accounts for extinct lineages
AA Davín, T Tricou, E Tannier, DM de Vienne, GJ Szöllősi
bioRxiv, 339473, 2018
52018
Ancestral genome organization as a diagnosis tool for phylogenomics
E Tannier, A Bazin, A Davín, L Guéguen, S Bérard, C Chauve
Phylogenetics in the Genomic Era, 2.5: 1--2.5: 19, 2020
42020
Parameter estimation and species tree rooting using ALE and GeneRax
TA Williams, AA Davín, B Morel, LL Szánthó, A Spang, A Stamatakis, ...
Genome Biology and Evolution 15 (7), evad134, 2023
32023
The power and limitations of species tree-aware phylogenetics
TA Williams, AA Davin, B Morel, LL Szánthó, A Spang, A Stamatakis, ...
BioRxiv, 2023.03. 17.533068, 2023
32023
Rooting species trees using gene tree-species tree reconciliation
BJ Harris, PO Sheridan, AA Davín, C Gubry-Rangin, GJ Szöllősi, ...
Environmental Microbial Evolution: Methods and Protocols, 189-211, 2022
22022
Relative Time Inference Using Lateral Gene Transfers
AA Davín, D Schrempf, TA Williams, P Hugenholtz, GJ Szöllősi
Environmental Microbial Evolution: Methods and Protocols, 75-94, 2022
12022
Gene transfers, like fossils, can date the tree of life
AA Davín, E Tannier, TA Williams, B Boussau, V Daubin, GJ Szöllősi
Biorxiv, 193813, 2017
12017
Dating with transfers
A Davín, GJ Szöllosi, E Tannier, B Boussau, V Daubin
Journées Ouvertes Biologie Informatique Mathématiques, 2016
12016
An evolutionary timescale for Bacteria calibrated using the Great Oxidation Event
AA Davin, BJ Woodcroft, RM Soo, R Murali, D Schrempf, J Clark, ...
bioRxiv, 2023.08. 08.552427, 2023
2023
Rooting species trees using gene tree-species tree reconciliation
JH Brogan, P Sheridan, AA Davín, C Gubry-Rangin, GJ Szöllősi, ...
Environmental Microbial Evolution, 2022
2022
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Articles 1–20