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Matthew  D Young
Matthew D Young
Wellcome Sanger Institute
Verified email at sanger.ac.uk - Homepage
Title
Cited by
Cited by
Year
Method Gene ontology analysis for RNA-seq: accounting for selection bias
MD Young, MJ Wakefield, GK Smyth, A Oshlack
5958*2010
From RNA-seq reads to differential expression results
A Oshlack, MD Robinson, MD Young
Genome biology 11 (12), 220, 2010
9452010
SoupX removes ambient RNA contamination from droplet-based single-cell RNA sequencing data
MD Young, S Behjati
Gigascience 9 (12), giaa151, 2020
6392020
Single-cell transcriptomes from human kidneys reveal the cellular identity of renal tumors
MD Young, TJ Mitchell, FAV Braga, MGB Tran, BJ Stewart, JR Ferdinand, ...
Science 361 (6402), 594-599, 2018
5602018
BBKNN: fast batch alignment of single cell transcriptomes
K Polański, MD Young, Z Miao, KB Meyer, SA Teichmann, JE Park
Bioinformatics 36 (3), 964-965, 2020
5342020
Intra-tumour diversification in colorectal cancer at the single-cell level
SF Roerink, N Sasaki, H Lee-Six, MD Young, LB Alexandrov, S Behjati, ...
Nature 556 (7702), 457-462, 2018
4602018
Decoding human fetal liver haematopoiesis
DM Popescu, RA Botting, E Stephenson, K Green, S Webb, L Jardine, ...
Nature 574 (7778), 365-371, 2019
4282019
ChIP-seq analysis reveals distinct H3K27me3 profiles that correlate with transcriptional activity
MD Young, TA Willson, MJ Wakefield, E Trounson, DJ Hilton, ME Blewitt, ...
Nucleic Acids Research 39 (17), 7415-7427, 2011
3392011
Spatiotemporal immune zonation of the human kidney
BJ Stewart, JR Ferdinand, MD Young, TJ Mitchell, KW Loudon, AM Riding, ...
Science 365 (6460), 1461-1466, 2019
3152019
Recurrent mutation of IGF signalling genes and distinct patterns of genomic rearrangement in osteosarcoma
S Behjati, PS Tarpey, K Haase, H Ye, MD Young, LB Alexandrov, ...
Nature communications 8 (1), 15936, 2017
2072017
goseq: Gene Ontology testing for RNA-seq datasets
MD Young, MJ Wakefield, GK Smyth, A Oshlack
1652011
Global changes in the mammary epigenome are induced by hormonal cues and coordinated by Ezh2
B Pal, T Bouras, W Shi, F Vaillant, JM Sheridan, N Fu, K Breslin, K Jiang, ...
Cell reports 3 (2), 411-426, 2013
1492013
Rearrangement bursts generate canonical gene fusions in bone and soft tissue tumors
ND Anderson, R de Borja, MD Young, F Fuligni, A Rosic, ND Roberts, ...
Science 361 (6405), eaam8419, 2018
1462018
Inherent mosaicism and extensive mutation of human placentas
THH Coorens, TRW Oliver, R Sanghvi, U Sovio, E Cook, R Vento-Tormo, ...
Nature 592 (7852), 80-85, 2021
1452021
The driver landscape of sporadic chordoma
PS Tarpey, S Behjati, MD Young, I Martincorena, LB Alexandrov, ...
Nature communications 8 (1), 890, 2017
1292017
Embryonal precursors of Wilms tumor
THH Coorens, TD Treger, R Al-Saadi, L Moore, MGB Tran, TJ Mitchell, ...
Science 366 (6470), 1247-1251, 2019
1232019
Single-cell sequencing reveals clonal expansions of pro-inflammatory synovial CD8 T cells expressing tissue-homing receptors in psoriatic arthritis
F Penkava, MDC Velasco-Herrera, MD Young, N Yager, LN Nwosu, ...
Nature communications 11 (1), 1-11, 2020
1192020
Recurrent rearrangements of FOS and FOSB define osteoblastoma
MW Fittall, W Mifsud, N Pillay, H Ye, AC Strobl, A Verfaillie, ...
Nature communications 9 (1), 2150, 2018
1152018
Tumor to normal single-cell mRNA comparisons reveal a pan-neuroblastoma cancer cell
G Kildisiute, WM Kholosy, MD Young, K Roberts, R Elmentaite, ...
Science Advances 7 (6), eabd3311, 2021
902021
Single-cell atlas of the first intra-mammalian developmental stage of the human parasite Schistosoma mansoni
CLD Soria, J Lee, T Chong, A Coghlan, A Tracey, MD Young, T Andrews, ...
Nature Communications 11 (1), 1-16, 2020
632020
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Articles 1–20