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CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
JD Thompson, DG Higgins, TJ Gibson
Nucleic acids research 22 (22), 4673, 1994
724831994
The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
JD Thompson, TJ Gibson, F Plewniak, F Jeanmougin, DG Higgins
Nucleic acids research 25 (24), 4876-4882, 1997
449821997
Clustal W and Clustal X version 2.0
MA Larkin, G Blackshields, NP Brown, R Chenna, PA McGettigan, ...
bioinformatics 23 (21), 2947-2948, 2007
302282007
Fast, scalable generation of high‐quality protein multiple sequence alignments using Clustal Omega
F Sievers, A Wilm, D Dineen, TJ Gibson, K Karplus, W Li, R Lopez, ...
Molecular systems biology 7 (1), 539, 2011
132552011
T-Coffee: A novel method for fast and accurate multiple sequence alignment
C Notredame, DG Higgins, J Heringa
Journal of molecular biology 302 (1), 205-217, 2000
81832000
Multiple sequence alignment with the Clustal series of programs
R Chenna, H Sugawara, T Koike, R Lopez, TJ Gibson, DG Higgins, ...
Nucleic acids research 31 (13), 3497-3500, 2003
57542003
CLUSTAL: a package for performing multiple sequence alignment on a microcomputer
DG Higgins, PM Sharp
Gene 73 (1), 237-244, 1988
43411988
CLUSTAL V: improved software for multiple sequence alignment
DG Higgins, AJ Bleasby, R Fuchs
Computer applications in the biosciences: CABIOS 8 (2), 189, 1992
32711992
Multiple sequence alignment with Clustal X
F Jeanmougin, JD Thompson, M Gouy, DG Higgins, TJ Gibson
Trends in biochemical sciences 23 (10), 403-405, 1998
31561998
Multiple sequence alignment using ClustalW and ClustalX
JD Thompson, TJ Gibson, DG Higgins
Current protocols in bioinformatics, 2.3. 1-2.3. 22, 2003
26902003
Fast and sensitive multiple sequence alignments on a microcomputer
DG Higgins, PM Sharp
Computer applications in the biosciences: CABIOS 5 (2), 151-153, 1989
21201989
[22] Using CLUSTAL for multiple sequence alignments
DG Higgins, JD Thompson, TJ Gibson
Methods in enzymology 266, 383-402, 1996
19961996
Clustal Omega for making accurate alignments of many protein sequences
F Sievers, DG Higgins
Protein Science 27 (1), 135-145, 2018
10262018
SAGA: sequence alignment by genetic algorithm
C Notredame, DG Higgins
Nucleic acids research 24 (8), 1515-1524, 1996
7511996
Codon usage patterns in Escherichia coli, Bacillus subtilis, Saccharomyces cerevisiae, Schizosaccharomyces pombe, Drosophila melanogaster and Homo sapiens; a review of the …
PM Sharp, E Cowe, DG Higgins, DC Shields, KH Wolfe, F Wright
Nucleic acids research 16 (17), 8207-8211, 1988
7511988
M-Coffee: combining multiple sequence alignment methods with T-Coffee
IM Wallace, O O'sullivan, DG Higgins, C Notredame
Nucleic acids research 34 (6), 1692-1699, 2006
6332006
" Silent" sites in Drosophila genes are not neutral: evidence of selection among synonymous codons.
DC Shields, PM Sharp, DG Higgins, F Wright
Molecular biology and evolution 5 (6), 704-716, 1988
6271988
Clustal omega
F Sievers, DG Higgins
Current protocols in bioinformatics 48 (1), 3.13. 1-3.13. 16, 2014
5402014
Comparison and evaluation of methods for generating differentially expressed gene lists from microarray data
IB Jeffery, DG Higgins, AC Culhane
BMC bioinformatics 7, 1-16, 2006
5102006
Getting better with bifidobacteria
SC Leahy, DG Higgins, GF Fitzgerald, D Van Sinderen
Journal of applied microbiology 98 (6), 1303-1315, 2005
4672005
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