Aurélien Mazurie
Aurélien Mazurie
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Gene networks inference using dynamic Bayesian networks
BE Perrin, L Ralaivola, A Mazurie, S Bottani, J Mallet, F d’Alche–Buc
Bioinformatics 19 (suppl 2), ii138-ii148, 2003
Potential role of multiple carbon fixation pathways during lipid accumulation in Phaeodactylum tricornutum
J Valenzuela, A Mazurie, RP Carlson, R Gerlach, KE Cooksey, BM Peyton, ...
Biotechnology for biofuels 5 (1), 40, 2012
SREBP coordinates iron and ergosterol homeostasis to mediate triazole drug and hypoxia responses in the human fungal pathogen Aspergillus fumigatus
M Blatzer, BM Barker, SD Willger, N Beckmann, SJ Blosser, EJ Cornish, ...
PLoS Genet 7 (12), e1002374, 2011
ChIP-seq and in vivo transcriptome analyses of the Aspergillus fumigatus SREBP SrbA reveals a new regulator of the fungal hypoxia response and virulence
D Chung, BM Barker, CC Carey, B Merriman, ER Werner, BE Lechner, ...
PLoS Pathog 10 (11), e1004487, 2014
Physiology of Pseudomonas aeruginosa in biofilms as revealed by transcriptome analysis
JP Folsom, L Richards, B Pitts, F Roe, GD Ehrlich, A Parker, A Mazurie, ...
BMC microbiology 10 (1), 294, 2010
An evolutionary and functional assessment of regulatory network motifs
A Mazurie, S Bottani, M Vergassola
Genome biology 6 (4), R35, 2005
Transcriptomic and proteomic analyses of the Aspergillus fumigatus hypoxia response using an oxygen-controlled fermenter
BM Barker, K Kroll, M Vödisch, A Mazurie, O Kniemeyer, RA Cramer
BMC genomics 13 (1), 62, 2012
Evolution of metabolic network organization
A Mazurie, D Bonchev, B Schwikowski, GA Buck
BMC Systems Biology 4 (1), 59, 2010
Phylogenetic distances are encoded in networks of interacting pathways
A Mazurie, D Bonchev, B Schwikowski, GA Buck
Bioinformatics 24 (22), 2579-2585, 2008
Application of support vector machines to metabolomics experiments with limited replicates
J Heinemann, A Mazurie, M Tokmina-Lukaszewska, GJ Beilman, ...
Metabolomics 10 (6), 1121-1128, 2014
Viral assemblage composition in Yellowstone acidic hot springs assessed by network analysis
B Bolduc, JF Wirth, A Mazurie, MJ Young
The ISME journal 9 (10), 2162-2177, 2015
A novel sensitive microarray approach for differential screening using probes labelled with two different radioelements
H Salin, T Vujasinovic, A Mazurie, S Maitrejean, C Menini, J Mallet, ...
Nucleic acids research 30 (4), e17-e17, 2002
Hypothyroidism risk compared among nine common bipolar disorder therapies in a large US cohort
CG Lambert, AJ Mazurie, NR Lauve, NG Hurwitz, SS Young, ...
Bipolar Disorders 18 (3), 247-260, 2016
Comparative genomics of Cryptosporidium
AJ Mazurie, JM Alves, LS Ozaki, S Zhou, DC Schwartz, GA Buck
International journal of genomics 2013, 2013
Intensive herbicide use has selected for constitutively elevated levels of stress‐responsive mRNAs and proteins in multiple herbicide‐resistant Avena fatua L.
BK Keith, EE Burns, B Bothner, CC Carey, AJ Mazurie, JK Hilmer, ...
Pest Management Science, 2017
Real-time digitization of metabolomics patterns from a living system using mass spectrometry
J Heinemann, B Noon, MJ Mohigmi, A Mazurie, DL Dickensheets, ...
Journal of The American Society for Mass Spectrometry 25 (10), 1755-1762, 2014
A dynamic model of gene regulatory networks based on inertia principle
F d’Alché-Buc, PJ Lahaye, BE Perrin, L Ralaivola, T Vujasinovic, ...
Bioinformatics Using Computational Intelligence Paradigms, 93-117, 2005
In situ gene expression profiling of the thermoacidophilic alga Cyanidioschyzon in relation to visible and ultraviolet irradiance
DJ Skorupa, RW Castenholz, A Mazurie, C Carey, F Rosenzweig, ...
Environmental microbiology 16 (6), 1627-1641, 2014
Integrating genome‐scale data for gene essentiality prediction
SB Roberts, AJ Mazurie, GA Buck
Chemistry & biodiversity 4 (11), 2618-2630, 2007
Inference of gene regulatory network with Dynamic Bayesian Network
BE Perrin, L Ralaivola, A Mazurie, S Bottani, J Mallet, F d’Alché Buc
Bioinformatics 19, i386-i49, 2003
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