| TBtools: An Integrative Toolkit Developed for Interactive Analyses of Big Biological Data C Chen, H Chen, Y Zhang, HR Thomas, MH Frank, Y He, R Xia Molecular Plant 13 (8), 1194-1202, 2020 | 8569 | 2020 |
| EasyCodeML: A visual tool for analysis of selection using CodeML F Gao, C Chen, DA Arab, Z Du, Y He, SYW Ho Ecology and evolution 9 (7), 3891-3898, 2019 | 301 | 2019 |
| Genome-wide investigation of WRKY gene family in pineapple: evolution and expression profiles during development and stress T Xie, C Chen, C Li, J Liu, C Liu, Y He BMC genomics 19, 1-18, 2018 | 268 | 2018 |
| TBtools-II: A" One for All, All for One" bioinformatics platform for biological big-data mining C Chen, Y Wu, J Li, X Wang, Z Zeng, J Xu, Y Liu, J Feng, H Chen, Y He, ... Molecular Plant, 2023 | 175 | 2023 |
| Two divergent haplotypes from a highly heterozygous lychee genome suggest independent domestication events for early and late-maturing cultivars G Hu, J Feng, X Xiang, J Wang, J Salojärvi, C Liu, Z Wu, J Zhang, X Liang, ... Nature genetics 54 (1), 73-83, 2022 | 106 | 2022 |
| 24-nt reproductive phasiRNAs are broadly present in angiosperms R Xia, C Chen, S Pokhrel, W Ma, K Huang, P Patel, F Wang, J Xu, Z Liu, ... Nature communications 10 (1), 627, 2019 | 105 | 2019 |
| Genome-wide organization and expression profiling of the R2R3-MYB transcription factor family in pineapple (Ananas comosus) C Liu, T Xie, C Chen, A Luan, J Long, C Li, Y Ding, Y He BMC genomics 18, 1-16, 2017 | 105 | 2017 |
| Small RNAs, emerging regulators critical for the development of horticultural traits C Chen, Z Zeng, Z Liu, R Xia Horticulture Research 5, 2018 | 94 | 2018 |
| sRNAanno—a database repository of uniformly annotated small RNAs in plants C Chen, J Li, J Feng, B Liu, L Feng, X Yu, G Li, J Zhai, BC Meyers, R Xia Horticulture Research 8, 2021 | 81 | 2021 |
| Natural variations in the MYB transcription factor MYB31 determine the evolution of extremely pungent peppers Z Zhu, B Sun, W Cai, X Zhou, Y Mao, C Chen, J Wei, B Cao, C Chen, ... New Phytologist 223 (2), 922-938, 2019 | 77 | 2019 |
| Transcriptomic Analysis Reveals Key Genes Related to Betalain Biosynthesis in Pulp Coloration of Hylocereus polyrhizus H Qingzhu, C Chengjie, C Zhe, C Pengkun, M Yuewen, W Jingyu, Z Jian, ... Frontiers in Plant Science 6, 1179, 2016 | 72 | 2016 |
| Micro RNA 528, a hub regulator modulating ROS homeostasis via targeting of a diverse set of genes encoding copper‐containing proteins in monocots H Zhu, C Chen, J Zeng, Z Yun, Y Liu, H Qu, Y Jiang, X Duan, R Xia New Phytologist 225 (1), 385-399, 2020 | 65 | 2020 |
| Coexpression network analysis reveals an MYB transcriptional activator involved in capsaicinoid biosynthesis in hot peppers B Sun, X Zhou, C Chen, C Chen, K Chen, M Chen, S Liu, G Chen, B Cao, ... Horticulture research 7, 2020 | 60 | 2020 |
| Jasmonate-Inducible R2R3-MYB Transcription Factor Regulates Capsaicinoid Biosynthesis and Stamen Development in Capsicum B Sun, Z Zhu, C Chen, G Chen, B Cao, C Chen, J Lei Journal of agricultural and food chemistry 67 (39), 10891-10903, 2019 | 50 | 2019 |
| Integrative effect of drought and low temperature on litchi (Litchi chinensis Sonn.) floral initiation revealed by dynamic genome-wide transcriptome analysis J Shen, Q Xiao, H Qiu, C Chen, H Chen Scientific Reports 6 (1), 32005, 2016 | 49 | 2016 |
| Coupling of micro RNA‐directed phased small interfering RNA generation from long noncoding genes with alternative splicing and alternative polyadenylation in small RNA‐mediated … W Ma, C Chen, Y Liu, M Zeng, BC Meyers, J Li, R Xia New Phytologist 217 (4), 1535-1550, 2018 | 48 | 2018 |
| Characterization and expression analysis of AcSERK2, a somatic embryogenesis and stress resistance related gene in pineapple J Ma, Y He, Z Hu, W Xu, J Xia, C Guo, S Lin, L Cao, C Chen, C Wu, ... Gene 500 (1), 115-123, 2012 | 39 | 2012 |
| A painless way to customize Circos plot: From data preparation to visualization using TBtools C Chen, Y Wu, R Xia Imeta 1 (3), e35, 2022 | 36 | 2022 |
| MicroRNA482/2118, a miRNA superfamily essential for both disease resistance and plant development Y Zhang, M Waseem, Z Zeng, J Xu, C Chen, Y Liu, J Zhai, R Xia New Phytologist 233 (5), 2047-2057, 2022 | 36 | 2022 |
| Transcriptomic analysis reveals the possible roles of sugar metabolism and export for positive mycorrhizal growth responses in soybean S Zhao, A Chen, C Chen, C Li, R Xia, X Wang Physiologia plantarum 166 (3), 712-728, 2019 | 35 | 2019 |
