| CRISPR-Cas9-based mutagenesis frequently provokes on-target mRNA misregulation R Tuladhar, Y Yeu, J Tyler Piazza, Z Tan, J Rene Clemenceau, X Wu, ... Nature communications 10 (1), 4056, 2019 | 195 | 2019 |
| TurboFold II: RNA structural alignment and secondary structure prediction informed by multiple homologs Z Tan, Y Fu, G Sharma, DH Mathews Nucleic acids research 45 (20), 11570-11581, 2017 | 121 | 2017 |
| The EN-TEx resource of multi-tissue personal epigenomes & variant-impact models J Rozowsky, J Gao, B Borsari, YT Yang, T Galeev, G Gürsoy, CB Epstein, ... Cell 186 (7), 1493-1511. e40, 2023 | 19 | 2023 |
| Modeling RNA secondary structure with sequence comparison and experimental mapping data Z Tan, G Sharma, DH Mathews Biophysical journal 113 (2), 330-338, 2017 | 17 | 2017 |
| Chemically Accurate Relative Folding Stability of RNA Hairpins from Molecular Simulations LG Smith, Z Tan, A Spasic, D Dutta, LA Salas-Estrada, A Grossfield, ... Journal of chemical theory and computation 14 (12), 6598-6612, 2018 | 15 | 2018 |
| Multi-tissue integrative analysis of personal epigenomes J Rozowsky, J Drenkow, Y Yang, G Gursoy, T Galeev, B Borsari, ... BioRxiv, 2021 | 7 | 2021 |
| 96 Benchmark of Amber ff12SB force field by comparison of estimated hairpin loop folding stabilities to experiments Z Tan, A Spasic, DH Mathews Journal of Biomolecular Structure and Dynamics 33 (sup1), 61-62, 2015 | 7 | 2015 |
| CRISPR R Tuladhar, Y Yeu, JT Piazza, Z Tan, JR Clemenceau, X Wu, TH Hwang Cas9-based mutagenesis frequently provokes on-target mRNA misregulation …, 2019 | 6 | 2019 |
| CRISPR-Cas9-based mutagenesis frequently provokes on-target mRNA misregulation. Nat. Commun. 10: 4056 R Tuladhar, Y Yeu, JT Piazza, Z Tan, JR Clemenceau, XF Wu, Q Barrett, ... | 5 | 2019 |
| Gene architecture influences on the outcome of INDEL‐based genome editing R Tuladhar, Y Yeu, JT Piazza, J Clemenceau, X Wu, Z Tan, D Mathews, ... The FASEB Journal 32, 649.8-649.8, 2018 | | 2018 |
| RNA End Fluctuations out of a Virus: A Parasite's Fishing ROD for Maximizing Amplification R Sportsman, L Oster, B Kartub, CM Knobler, WM Gelbart Biophysical Journal 114 (3), 435a, 2018 | | 2018 |
| Benchmarking RNA Force Fields using Hairpin Loop Folding Free Energy Change LG Smith, Z Tan, A Spasic, A Grossfield, DH Mathews Biophysical Journal 114 (3), 435a, 2018 | | 2018 |
| Modeling RNA Secondary Structure Using Structure Conservation Z Tan University of Rochester, 2018 | | 2018 |
David H. MathewsDepartment of Biochemistry and Biophysics, University of Rochester Medical CenterEmail verificata su urmc.rochester.edu
