Fabio Cumbo
Fabio Cumbo
Department of Cellular, Computational and Integrative Biology (CIBIO), University of Trento
Email verificata su unitn.it - Home page
Citata da
Citata da
Bioconda: sustainable and comprehensive software distribution for the life sciences
B Grüning, R Dale, A Sjödin, BA Chapman, J Rowe, CH Tomkins-Tinch, ...
Nature methods 15 (7), 475, 2018
Precise phylogenetic analysis of microbial isolates and genomes from metagenomes using PhyloPhlAn 3.0
F Asnicar, AM Thomas, F Beghini, C Mengoni, S Manara, P Manghi, ...
Nature communications 11 (1), 1-10, 2020
TCGA2BED: extracting, extending, integrating, and querying The Cancer Genome Atlas
F Cumbo, G Fiscon, S Ceri, M Masseroli, E Weitschek
BMC bioinformatics 18 (1), 1-9, 2017
Large-scale genome-wide analysis links lactic acid bacteria from food with the gut microbiome
E Pasolli, F De Filippis, IE Mauriello, F Cumbo, AM Walsh, J Leech, ...
Nature communications 11 (1), 1-12, 2020
Classification of large DNA methylation datasets for identifying cancer drivers
F Celli, F Cumbo, E Weitschek
Big data research 13, 21-28, 2018
GIANT: a cytoscape plugin for modular networks
F Cumbo, P Paci, D Santoni, L Di Paola, A Giuliani
PLoS One 9 (10), e105001, 2014
Microbial genomes from non-human primate gut metagenomes expand the primate-associated bacterial tree of life with over 1000 novel species
S Manara, F Asnicar, F Beghini, D Bazzani, F Cumbo, M Zolfo, E Nigro, ...
Genome biology 20 (1), 1-16, 2019
Genomic data integration: A case study on next generation sequencing of cancer
E Weitschek, F Cumbo, E Cappelli, G Felici
2016 27th International Workshop on Database and Expert Systems Applications …, 2016
IWTomics: testing high-resolution sequence-based ‘Omics’ data at multiple locations and scales
MA Cremona, A Pini, F Cumbo, KD Makova, F Chiaromonte, S Vantini
Bioinformatics 34 (13), 2289-2291, 2018
Classifying big DNA methylation data: a gene-oriented approach
E Weitschek, F Cumbo, E Cappelli, G Felici, P Bertolazzi
International Conference on Database and Expert Systems Applications, 138-149, 2018
Investigating transcription factor synergism in humans
F Cumbo, D Vergni, D Santoni
https://academic.oup.com/dnaresearch/article/4562529/Investigating …, 2017
COSYS: A computational infrastructure for systems biology
F Cumbo, MS Nobile, C Damiani, R Colombo, G Mauri, P Cazzaniga
International Meeting on Computational Intelligence Methods for …, 2016
Time dynamics of protein complexes in the AD11 transgenic mouse model for Alzheimer’s disease like pathology
I Arisi, M D’Onofrio, R Brandi, A Cattaneo, P Bertolazzi, F Cumbo, G Felici, ...
BMC neuroscience 16 (1), 1-15, 2015
OpenGDC: standardizing, extending, and integrating genomics data of cancer
E Cappelli, F Cumbo, A Bernasconi, M Masseroli, E Weitschek
ESCS 2018: 8th European Student Council Symposium, International Society for …, 2018
A collection of bacterial isolates from the pig intestine reveals functional and taxonomic diversity
D Wylensek, TCA Hitch, T Riedel, A Afrizal, N Kumar, E Wortmann, T Liu, ...
Nature communications 11 (1), 1-26, 2020
OpenGDC: Unifying, Modeling, Integrating Cancer Genomic Data and Clinical Metadata
E Cappelli, F Cumbo, A Bernasconi, A Canakoglu, S Ceri, M Masseroli, ...
Applied Sciences 10 (18), 6367, 2020
Smart persistence and accessibility of genomic and clinical data
E Cappelli, E Weitschek, F Cumbo
International Conference on Database and Expert Systems Applications, 8-14, 2019
GMS – Gammadiae Management System: cataloguing and interpretation project of the so-called gammadiae starting from the iconographic evidences in the Roman catacombs
C Cumbo, F Cumbo
Conservar Património, 2019
An ontology-based approach to improve data querying and organization of Alzheimer's Disease data
FT Ivan Arisi, Paola Bertolazzi, Eleonora Cappelli, Federica Conte, Fabio ...
2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2018), 2018
IRIS-TCGA: an information retrieval and integration system for genomic data of cancer
F Cumbo, E Weitschek, P Bertolazzi, G Felici
International Meeting on Computational Intelligence Methods for …, 2016
Il sistema al momento non può eseguire l'operazione. Riprova più tardi.
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