Matthias Scholz
TitleCited byYear
Kernel PCA and de-noising in feature spaces
S Mika, B Schölkopf, AJ Smola, KR Müller, M Scholz, G Rätsch
Advances in neural information processing systems 11 (1), 536-542, 1999
10151999
pcaMethods—a bioconductor package providing PCA methods for incomplete data
W Stacklies, H Redestig, M Scholz, D Walther, J Selbig
Bioinformatics 23 (9), 1164-1167, 2007
4972007
MetaPhlAn2 for enhanced metagenomic taxonomic profiling
DT Truong, EA Franzosa, TL Tickle, M Scholz, G Weingart, E Pasolli, ...
Nature methods 12 (10), 902, 2015
4472015
Metabolite fingerprinting: detecting biological features by independent component analysis
M Scholz, S Gatzek, A Sterling, O Fiehn, J Selbig
Bioinformatics 20 (15), 2447-2454, 2004
2722004
Non-linear PCA: a missing data approach
M Scholz, F Kaplan, CL Guy, J Kopka, J Selbig
Bioinformatics 21 (20), 3887-3895, 2005
1722005
Strain-level microbial epidemiology and population genomics from shotgun metagenomics
M Scholz, DV Ward, E Pasolli, T Tolio, M Zolfo, F Asnicar, DT Truong, ...
Nature methods 13 (5), 435, 2016
1232016
Nonlinear principal component analysis: neural network models and applications
M Scholz, M Fraunholz, J Selbig
Principal manifolds for data visualization and dimension reduction, 44-67, 2008
1222008
Integration of metabolomic and proteomic phenotypes: analysis of data covariance dissects starch and RFO metabolism from low and high temperature compensation response in …
S Wienkoop, K Morgenthal, F Wolschin, M Scholz, J Selbig, W Weckwerth
Molecular & Cellular Proteomics 7 (9), 1725-1736, 2008
1212008
A diet low in FODMAPs reduces symptoms in patients with irritable bowel syndrome and a probiotic restores bifidobacterium species: a randomized controlled trial
HM Staudacher, MCE Lomer, FM Farquharson, P Louis, F Fava, ...
Gastroenterology 153 (4), 936-947, 2017
1132017
Nonlinear PCA: a new hierarchical approach.
M Scholz, R Vigário
ESANN, 439-444, 2002
952002
Heterosis manifestation during early Arabidopsis seedling development is characterized by intermediate gene expression and enhanced metabolic activity in the hybrids
RC Meyer, H Witucka‐Wall, M Becher, A Blacha, A Boudichevskaia, ...
The Plant Journal 71 (4), 669-683, 2012
832012
Correlative GC-TOF-MS-based metabolite profiling and LC-MS-based protein profiling reveal time-related systemic regulation of metabolite–protein networks and improve pattern …
K Morgenthal, S Wienkoop, M Scholz, J Selbig, W Weckwerth
Metabolomics 1 (2), 109-121, 2005
832005
Bifidobacteria exhibit social behavior through carbohydrate resource sharing in the gut
C Milani, GA Lugli, S Duranti, F Turroni, L Mancabelli, C Ferrario, ...
Scientific reports 5, 15782, 2015
772015
Metagenomic Sequencing with Strain-Level Resolution Implicates Uropathogenic E. coli in Necrotizing Enterocolitis and Mortality in Preterm Infants
DV Ward, M Scholz, M Zolfo, DH Taft, KR Schibler, A Tett, N Segata, ...
Cell reports 14 (12), 2912-2924, 2016
722016
LC-MS based global metabolite profiling of grapes: solvent extraction protocol optimisation
G Theodoridis, H Gika, P Franceschi, L Caputi, P Arapitsas, M Scholz, ...
Metabolomics, 1-11, 2011
662011
A metabolomic approach to the study of wine micro-oxygenation
P Arapitsas, M Scholz, U Vrhovsek, S Di Blasi, AB Bartolini, D Masuero, ...
PLoS One 7 (5), e37783, 2012
602012
Studying vertical microbiome transmission from mothers to infants by strain-level metagenomic profiling
F Asnicar, S Manara, M Zolfo, DT Truong, M Scholz, F Armanini, P Ferretti, ...
MSystems 2 (1), e00164-16, 2017
572017
Approaches to analyse and interpret biological profile data
M Scholz
452006
Validation of nonlinear PCA
M Scholz
Neural processing letters 36 (1), 21-30, 2012
432012
Visualization and analysis of molecular data
M Scholz, J Selbig
Metabolomics, 87-104, 2007
342007
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Articles 1–20