Antoine Limasset
Antoine Limasset
CNRS, Université de Lille, Laboratoire CRIStAL, Equipe Bonsai
Email verificata su ens-cachan.fr - Home page
TitoloCitata daAnno
On the representation of de Bruijn graphs
R Chikhi, A Limasset, S Jackman, JT Simpson, P Medvedev
International conference on Research in computational molecular biology, 35-55, 2014
942014
Compacting de Bruijn graphs from sequencing data quickly and in low memory
R Chikhi, A Limasset, P Medvedev
Bioinformatics 32 (12), i201-i208, 2016
542016
Read mapping on de Bruijn graphs
A Limasset, B Cazaux, E Rivals, P Peterlongo
BMC bioinformatics 17 (1), 237, 2016
462016
Fast and scalable minimal perfect hashing for massive key sets
A Limasset, G Rizk, R Chikhi, P Peterlongo
arXiv preprint arXiv:1702.03154, 2017
262017
A resource-frugal probabilistic dictionary and applications in bioinformatics
C Marchet, L Lecompte, A Limasset, L Bittner, P Peterlongo
Discrete Applied Mathematics, 2018
12*2018
Toward perfect reads: short reads correction via mapping on compacted de Bruijn graphs
A Limasset, JF Flot, P Peterlongo
BioRxiv, 558395, 2019
5*2019
ELECTOR: Evaluator for long reads correction methods
C Marchet, P Morisse, L Lecompte, A Lefebvre, T Lecroq, P Peterlongo, ...
NAR Genomics and Bioinformatics 2 (1), lqz015, 2019
22019
Indexing De Bruijn graphs with minimizers
C Marchet, M Kerbiriou, A Limasset
BioRxiv, 546309, 2019
22019
CONSENT: Scalable self-correction of long reads with multiple sequence alignment
P Morisse, C Marchet, A Limasset, T Lecroq, A Lefebvre
BioRxiv, 546630, 2019
12019
Assembly improvements by read mapping and phasing
A Limasset
Ph. D. dissertation, IRISA, Inria Rennes, 2014
12014
Million sequences indexing
A Limasset
BMC BIOINFORMATICS 20, 2019
2019
Read correction for non-uniform coverages
C Marchet, Y Dufresne, A Limasset
bioRxiv, 673624, 2019
2019
Indexing de Bruijn graph with minimizers
A Limasset
2018
ELECTOR: EvaLuation of Error Correction Tools for lOng Reads
L Lecompte, C Marchet, P Morisse, A Limasset, P Peterlongo, A Lefebvre, ...
2018
Novel approaches for the exploitation of high throughput sequencing data
A Limasset
2017
Minimal perfect hash functions in large scale bioinformatics Problem
A Limasset, C Marchet, P Peterlongo, L Bittner
2016
BGREAT: A De Bruijn graph read mapping tool
A Limasset, P Peterlongo
2015
Minimal perfect hash functions in large scale bioinformatics
A Limasset, C Marchet, P Peterlongo
Prague Stringology Conference 2016
C Marchet, A Limasset, L Bittner, P Peterlongo
Il sistema al momento non può eseguire l'operazione. Riprova più tardi.
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