|microRNAs exhibit high frequency genomic alterations in human cancer|
L Zhang, J Huang, N Yang, J Greshock, MS Megraw, A Giannakakis, ...
Proceedings of the National Academy of Sciences 103 (24), 9136-9141, 2006
|A guide through present computational approaches for the identification of mammalian microRNA targets|
P Sethupathy, M Megraw, AG Hatzigeorgiou
Nature methods 3 (11), 881, 2006
|Genomic and epigenetic alterations deregulate microRNA expression in human epithelial ovarian cancer|
L Zhang, S Volinia, T Bonome, GA Calin, J Greshock, N Yang, CG Liu, ...
Proceedings of the National Academy of Sciences 105 (19), 7004-7009, 2008
|miRGen: a database for the study of animal microRNA genomic organization and function|
M Megraw, P Sethupathy, B Corda, AG Hatzigeorgiou
Nucleic acids research 35 (suppl_1), D149-D155, 2006
|Frequency and fate of microRNA editing in human brain|
Y Kawahara, M Megraw, E Kreider, H Iizasa, L Valente, AG Hatzigeorgiou, ...
Nucleic acids research 36 (16), 5270, 2008
|Editing of Epstein-Barr virus-encoded BART6 microRNAs controls their dicer targeting and consequently affects viral latency|
H Iizasa, BE Wulff, NR Alla, M Maragkakis, M Megraw, A Hatzigeorgiou, ...
Journal of Biological Chemistry 285 (43), 33358-33370, 2010
|MicroRNA promoter element discovery in Arabidopsis|
M Megraw, V Baev, V Rusinov, ST Jensen, K Kalantidis, ...
Rna 12 (9), 1612-1619, 2006
|miRGen 2.0: a database of microRNA genomic information and regulation|
P Alexiou, T Vergoulis, M Gleditzsch, G Prekas, T Dalamagas, M Megraw, ...
Nucleic acids research 38 (suppl_1), D137-D141, 2009
|A stele‐enriched gene regulatory network in the Arabidopsis root|
SM Brady, L Zhang, M Megraw, NJ Martinez, E Jiang, SY Charles, W Liu, ...
Molecular Systems Biology 7 (1), 2011
|The protein expression landscape of the Arabidopsis root|
JJ Petricka, MA Schauer, M Megraw, NW Breakfield, JW Thompson, ...
Proceedings of the National Academy of Sciences 109 (18), 6811-6818, 2012
|MicroRNAs in ovarian carcinomas|
N Dahiya, PJ Morin
Endocrine-related cancer 17 (1), F77-F89, 2010
|Alternative splicing in plants: directing traffic at the crossroads of adaptation and environmental stress|
S Filichkin, HD Priest, M Megraw, TC Mockler
Current opinion in plant biology 24, 125-135, 2015
|Environmental stresses modulate abundance and timing of alternatively spliced circadian transcripts in Arabidopsis|
SA Filichkin, JS Cumbie, P Dharmawardhana, P Jaiswal, JH Chang, ...
Molecular plant 8 (2), 207-227, 2015
|Paired-end analysis of transcription start sites in Arabidopsis reveals plant-specific promoter signatures|
T Morton, J Petricka, DL Corcoran, S Li, CM Winter, A Carda, PN Benfey, ...
The Plant Cell 26 (7), 2746-2760, 2014
|A transcription factor affinity-based code for mammalian transcription initiation|
M Megraw, F Pereira, ST Jensen, U Ohler, AG Hatzigeorgiou
Genome research 19 (4), 644-656, 2009
|The cyclophilin A DIAGEOTROPICA gene affects auxin transport in both root and shoot to control lateral root formation|
MG Ivanchenko, J Zhu, B Wang, E Medvecká, Y Du, E Azzarello, ...
Development 142 (4), 712-721, 2015
|A comparative study of ripening among berries of the grape cluster reveals an altered transcriptional programme and enhanced ripening rate in delayed berries|
S Gouthu, ST O’Neil, Y Di, M Ansarolia, M Megraw, LG Deluc
Journal of experimental botany 65 (20), 5889-5902, 2014
|Establishment of Expression in the SHORTROOT-SCARECROW Transcriptional Cascade through Opposing Activities of Both Activators and Repressors|
EE Sparks, C Drapek, A Gaudinier, S Li, M Ansariola, N Shen, ...
Developmental cell 39 (5), 585-596, 2016
|MicroRNA promoter analysis|
M Megraw, AG Hatzigeorgiou
Plant MicroRNAs, 149-161, 2010
|Improved DNase-seq protocol facilitates high resolution mapping of DNase I hypersensitive sites in roots in Arabidopsis thaliana|
JS Cumbie, SA Filichkin, M Megraw
Plant Methods 11 (1), 42, 2015