| Diagnosis of Zika virus infection by peptide array and enzyme-linked immunosorbent assay N Mishra, A Caciula, A Price, R Thakkar, J Ng, LV Chauhan, K Jain, ... MBio 9 (2), 2018 | 30 | 2018 |
| A multiplex serologic platform for diagnosis of tick-borne diseases R Tokarz, N Mishra, T Tagliafierro, S Sameroff, A Caciula, L Chauhan, ... Scientific reports 8 (1), 1-10, 2018 | 28 | 2018 |
| Antibodies to enteroviruses in cerebrospinal fluid of patients with acute flaccid myelitis N Mishra, TFF Ng, RL Marine, K Jain, J Ng, R Thakkar, A Caciula, A Price, ... MBio 10 (4), e01903-19, 2019 | 25 | 2019 |
| An integer programming approach to novel transcript reconstruction from paired-end RNA-Seq reads S Mangul, A Caciula, S Al Seesi, D Brinza, AR Banday, R Kanadia Proceedings of the ACM Conference on Bioinformatics, Computational Biology …, 2012 | 21 | 2012 |
| Developing a multifunctional network laboratory for teaching and research X Cao, Y Wang, A Caciula, Y Wang Proceedings of the 10th ACM conference on SIG-information technology …, 2009 | 15 | 2009 |
| Transcriptome assembly and quantification from Ion Torrent RNA-Seq data S Mangul, A Caciula, S Al Seesi, D Brinza, I Mӑndoiu, A Zelikovsky BMC genomics 15 (5), 1-11, 2014 | 14 | 2014 |
| Influence of symbiont-produced bioactive natural products on holobiont fitness in the marine bryozoan, Bugula neritina via protein kinase C (PKC) M Mathew, KI Bean, Y Temate-Tiagueu, A Caciula, II Mandoiu, ... Marine biology 163 (2), 44, 2016 | 9 | 2016 |
| Rna-seq based discovery and reconstruction of unannotated transcripts in partially annotated genomes S Mangul, A Caciula, I Mandoiu, A Zelikovsky 2011 IEEE International Conference on Bioinformatics and Biomedicine …, 2011 | 9 | 2011 |
| Improved transcriptome quantification and reconstruction from RNA-Seq reads using partial annotations S Mangul, A Caciula, O Glebova, I Mandoiu, A Zelikovsky In silico biology 11 (5, 6), 251-261, 2011 | 8 | 2011 |
| DEvis: an R package for aggregation and visualization of differential expression data A Price, A Caciula, C Guo, B Lee, J Morrison, A Rasmussen, WI Lipkin, ... BMC bioinformatics 20 (1), 1-7, 2019 | 5 | 2019 |
| Identification of immunoreactive linear epitopes of Borrelia miyamotoi R Tokarz, T Tagliafierro, A Caciula, N Mishra, R Thakkar, LV Chauhan, ... Ticks and tick-borne diseases 11 (1), 101314, 2020 | 4 | 2020 |
| Transcriptome reconstruction and quantification from RNA sequencing Data S Al Seesi, S Mangul, A Caciula, A Zelikovsky, I Măndoiu Genome Analysis: Current Procedures and Applications, 39, 2014 | 3 | 2014 |
| Deterministic regression algorithm for transcriptome frequency estimation A Caciula, O Glebova, A Artyomenko, S Mangul, J Lindsay, II Măndoiu, ... 2014 IEEE 4th International Conference on Computational Advances in Bio and …, 2014 | 2 | 2014 |
| Optimization techniques for next-generation sequencing data analysis A Caciula | 2 | 2014 |
| Batch scheduling in optical networks with feedback/feed-forward fiber delay lines Y Wang, X Cao, A Caciula, Q Hu 2012 IEEE Global Communications Conference (GLOBECOM), 2965-2970, 2012 | 2 | 2012 |
| Spillover of ebolaviruses into people in Eastern Democratic Republic of Congo prior to the 2018 Ebola virus disease outbreak T Goldstein, MN Belaganahalli, EK Syaluha, JPK Lukusa, DJ Greig, ... One health outlook 2 (1), 1-10, 2020 | 1 | 2020 |
| Simulated Regression Algorithm for Transcriptome Quantification A Caciula, O Glebova, A Artyomenko, S Mangul, J Lindsay, II Mandoiu, ... Bioinformatics Research and Applications: 10th International Symposium …, 2014 | 1 | 2014 |
| Monte-Carlo Regression algorithm for isoform frequency estimation from RNA-Seq data A Caciula, A Zelikovsky, S Mangul, J Lindsay, I Mandoiu 2013 IEEE 3rd International Conference on Computational Advances in Bio and …, 2013 | 1 | 2013 |
| Batch scheduling in optical networks Y Wang, X Cao, A Caciula, Q Hu Journal of Optical Communications and Networking 5 (2), 116-126, 2013 | 1 | 2013 |
| On-line batch scheduling in distributed optical networks Y Wang, X Cao, A Caciula, Q Hu 2012 IEEE 26th International Parallel and Distributed Processing Symposium …, 2012 | 1 | 2012 |
