Riccardo Dondi

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Citations	1460	657
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i10-index	45	27

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Gianluca Della VedovaUniversità degli Studi di Milano-BicoccaVerified email at dellavedova.org
Giancarlo MauriProfessor of Computer Science - University of Milano-BicoccaVerified email at disco.unimib.it
Italo ZoppisDipartimento di Informatica, Sistemistica e Comunicazione, Università degli Studi di Milano-BicoccaVerified email at unimib.it
Yuri PirolaAssistant professor at DISCo, Univ. of Milano-BicoccaVerified email at unimib.it
Guillaume FertinUniversity of Nantes, LS2N, FranceVerified email at univ-nantes.fr
Florian SikoraLAMSADE, Université Paris-DauphineVerified email at dauphine.fr
Stéphane VialetteLIGM, Univ Gustave Eiffel, CNRS, F-77454 Marne-la-Vallée, FranceVerified email at univ-eiffel.fr
Stefano BerettaSan Raffaele Telethon Institute for Gene TherapyVerified email at hsr.it
Mauro CastelliNOVA IMS, Universidade Nova de LisboaVerified email at novaims.unl.pt
Gunnar W. KlauHeinrich Heine University DüsseldorfVerified email at hhu.de
Nadia PisantiUniversity of Pisa & Erable Team INRIAVerified email at di.unipi.it
Flavio De PaoliUniversità di Milano-BicoccaVerified email at disco.unimib.it
Simone ZaccariaGroup Leader, University College London, Cancer InstituteVerified email at ucl.ac.uk
Alessandra AgostiniAssociate Professor of Computer Science, University of Milano-BicoccaVerified email at unimib.it
Eduardo SontagNortheastern University ECE and BioEVerified email at northeastern.edu
Bhaskar DasGuptaProfessor of Computer Science, University of Illinois at ChicagoVerified email at uic.edu
Raffaella RizziRicercatore confermato in Informatica, Università degli Studi di Milano-BicoccaVerified email at disco.unimib.it
Tao JiangUC RiversideVerified email at cs.ucr.edu
Reka AlbertDistinguished Professor, Penn StateVerified email at psu.edu
Jing LiProfessor, Computer and Data Sciences, Case Western Reserve UniversityVerified email at case.edu

Riccardo Dondi

Università degli studi di Bergamo

Verified email at unibg.it - Homepage

Algorithms Bioinformatics


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The haplotyping problem: an overview of computational models and solutions P Bonizzoni, G Della Vedova, R Dondi, J Li Journal of Computer Science and Technology 18 (6), 675-688, 2003	156	2003
Reconciling a gene tree to a species tree under the duplication cost model P Bonizzoni, GD Vedova, R Dondi Theoretical computer science 347 (1), 36-53, 2005	91	2005
Stimulating knowledge discovery and sharing A Agostini, S Albolino, G De Michelis, F De Paoli, R Dondi Proceedings of the 2003 international ACM SIGGROUP conference on Supporting …, 2003	87	2003
A novel method for signal transduction network inference from indirect experimental evidence R Albert, B DasGupta, R Dondi, S Kachalo, E Sontag, A Zelikovsky, ... Journal of Computational Biology 14 (7), 927-949, 2007	64	2007
HapCol: accurate and memory-efficient haplotype assembly from long reads Y Pirola, S Zaccaria, R Dondi, GW Klau, N Pisanti, P Bonizzoni Bioinformatics 32 (11), 1610-1617, 2016	49	2016
On the approximation of correlation clustering and consensus clustering P Bonizzoni, G Della Vedova, R Dondi, T Jiang Journal of Computer and System Sciences 74 (5), 671-696, 2008	43	2008
Exemplar longest common subsequence P Bonizzoni, G Della Vedova, R Dondi, G Fertin, R Rizzi, S Vialette IEEE/ACM Transactions on Computational Biology and Bioinformatics 4 (4), 535-543, 2007	43	2007
Variants of constrained longest common subsequence P Bonizzoni, G Della Vedova, R Dondi, Y Pirola Information Processing Letters 110 (20), 877-881, 2010	40	2010
Complexity issues in vertex-colored graph pattern matching R Dondi, G Fertin, S Vialette Journal of Discrete Algorithms 9 (1), 82-99, 2011	38	2011
The link between orthology relations and gene trees: a correction perspective M Lafond, R Dondi, N El-Mabrouk Algorithms for Molecular Biology 11 (1), 1-13, 2016	33	2016
The binary perfect phylogeny with persistent characters P Bonizzoni, C Braghin, R Dondi, G Trucco Theoretical computer science 454, 51-63, 2012	33	2012
Maximum motif problem in vertex-colored graphs R Dondi, G Fertin, S Vialette Annual Symposium on Combinatorial Pattern Matching, 221-235, 2009	31	2009
On the minimum error correction problem for haplotype assembly in diploid and polyploid genomes P Bonizzoni, R Dondi, GW Klau, Y Pirola, N Pisanti, S Zaccaria Journal of Computational Biology 23 (9), 718-736, 2016	29	2016
Inferring (biological) signal transduction networks via transitive reductions of directed graphs R Albert, B DasGupta, R Dondi, E Sontag Algorithmica 51 (2), 129-159, 2008	26	2008
Gene tree correction for reconciliation and species tree inference: complexity and algorithms R Dondi, N El-Mabrouk, KM Swenson Journal of Discrete Algorithms 25, 51-65, 2014	22	2014
On the parameterized complexity of the repetition free longest common subsequence problem G Blin, P Bonizzoni, R Dondi, F Sikora Information Processing Letters 112 (7), 272-276, 2012	22	2012
Weak pattern matching in colored graphs: Minimizing the number of connected components R Dondi, G Fertin, S Vialette Theoretical Computer Science, 27-38, 2007	22	2007
Correlation clustering and consensus clustering P Bonizzoni, GD Vedova, R Dondi, T Jiang International Symposium on Algorithms and Computation, 226-235, 2005	22	2005
Polytomy refinement for the correction of dubious duplications in gene trees M Lafond, C Chauve, R Dondi, N El-Mabrouk Bioinformatics 30 (17), i519-i526, 2014	21	2014
The k-Anonymity Problem Is Hard P Bonizzoni, GD Vedova, R Dondi International Symposium on Fundamentals of Computation Theory, 26-37, 2009	21	2009

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