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Vigneshwar Ramakrishnan
Vigneshwar Ramakrishnan
Verified email at scbt.sastra.edu
Title
Cited by
Cited by
Year
Identification of coding and non-coding sequences using local Hölder exponent formalism
OC Kulkarni, R Vigneshwar, VK Jayaraman, BD Kulkarni
Bioinformatics 21 (20), 3818-3823, 2005
292005
Genome inventory and analysis of nuclear hormone receptors in Tetraodon nigroviridis
RPR Metpally, R Vigneshwar, R Sowdhamini
Journal of biosciences 32, 43-50, 2007
212007
Macromolecular crowding in vitro as means of emulating cellular interiors: When less might be more
KS Harve, R Vigneshwar, R Rajagopalan, M Raghunath
Proceedings of the National Academy of Sciences 105 (51), E119-E119, 2008
162008
Effects of polydisperse crowders on aggregation reactions: A molecular thermodynamic analysis
D Shah, AL Tan, V Ramakrishnan, J Jiang, R Rajagopalan
The Journal of chemical physics 134 (6), 2011
152011
Identification of glucose-binding pockets in human serum albumin using support vector machine and molecular dynamics simulations
P Ranganarayanan, N Thanigesan, V Ananth, VK Jayaraman, ...
IEEE/ACM Transactions on Computational Biology and Bioinformatics 13 (1 …, 2015
122015
Investigations on a polyherbal formulation for treatment of cognitive impairment in a cholinergic dysfunctional rodent model
K Rajendran, DR Chellappan, S Sankaranarayanan, V Ramakrishnan, ...
Neurochemistry International 141, 104890, 2020
92020
Interaction of Tenebrio Molitor Antifreeze Protein with Ice Crystal: Insights from Molecular Dynamics Simulations
L Ramya, V Ramakrishnan
Molecular Informatics 35 (6-7), 268-277, 2016
92016
Transcriptional regulation of the pregnane-X receptor by the Ayurvedic formulation Chandraprabha Vati
S Selvaraj, R Ramanathan, V Vasudevaraja, KS Rajan, S Krishnaswamy, ...
RSC advances 4 (110), 64967-64976, 2014
82014
Dynamics and thermodynamics of water around EcoRI bound to a minimally mutated DNA chain
V Ramakrishnan, R Rajagopalan
Physical Chemistry Chemical Physics 14 (35), 12277-12284, 2012
72012
Dynamic and structural changes in the minimally restructuring ecori bound to a minimally mutated dna chain
V Ramakrishnan, S Jagannathan, AR Shaikh, R Rajagopalan
Journal of Biomolecular Structure and Dynamics 29 (4), 743-756, 2012
52012
Support vector machine-based prediction of pore-forming toxins (PFT) using distributed representation of reduced alphabets
H Bhosale, V Ramakrishnan, VK Jayaraman
Journal of Bioinformatics and Computational Biology 19 (05), 2150028, 2021
42021
Investigating the effect of charged amino acids on DNA conformation in EcoRI–DNA complex: a molecular dynamics simulation study
S Ramachandrakurup, S Ammapalli, V Ramakrishnan
Journal of Biomolecular Structure and Dynamics 35 (16), 3540-3554, 2017
42017
Effect of glycerol on free DNA: A molecular dynamics simulation study
A Diaz, HB Jothiraman, V Ramakrishnan
Journal of Molecular Graphics and Modelling 114, 108169, 2022
32022
Identification of phase separating proteins with distributed reduced alphabet representations of sequences
A Lahorkar, H Bhosale, A Sane, V Ramakrishnan, VK Jayaraman
IEEE/ACM Transactions on Computational Biology and Bioinformatics 20 (1 …, 2022
32022
Effect of osmolytes on the EcoRI endonuclease: Insights into hydration and protein dynamics from molecular dynamics simulations
A Diaz, V Ramakrishnan
Computational Biology and Chemistry 105, 107883, 2023
12023
Distributed Reduced Alphabet Representation for Predicting Proinflammatory Peptides
H Bhosale, A Sane, V Ramakrishnan, VK Jayaraman
International Conference on Data Management, Analytics & Innovation, 161-173, 2023
12023
Towards understanding the mechanism of action of a polyherbal formulation using a multi-pronged strategy
HA Preethy, K Rajendran, A Mishra, A Karthikeyan, DR Chellappan, ...
Computers in Biology and Medicine 141, 104999, 2022
12022
Effect of NaeI-L43K mutation on protein dynamics and DNA conformation: Insights from molecular dynamics simulations
S Ramachandrakurup, V Ramakrishnan
Journal of Molecular Graphics and Modelling 76, 456-465, 2017
12017
Protein feature engineering framework for AMPylation site prediction
H Prabhu, H Bhosale, A Sane, R Dhadwal, V Ramakrishnan, J Valadi
Scientific Reports 14 (1), 8695, 2024
2024
Therapeutic efficacy of Punarnavadi mandura against phenylhydrazine-induced hemolytic anemia in rats
K Rajendran, DR Chellappan, V Ramakrishnan, UM Krishnan
Journal of Traditional and Complementary Medicine, 2024
2024
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