| Methane utilization in Methylomicrobium alcaliphilum 20ZR: a systems approach IR Akberdin, M Thompson, R Hamilton, N Desai, D Alexander, CA Henard, ... Scientific reports 8 (1), 2512, 2018 | 112 | 2018 |
| Fatty acid biosynthesis pathways in Methylomicrobium buryatense 5G (B1) A Demidenko, IR Akberdin, M Allemann, EE Allen, MG Kalyuzhnaya Frontiers in microbiology 7, 236964, 2017 | 62 | 2017 |
| BioUML: an integrated environment for systems biology and collaborative analysis of biomedical data F Kolpakov, I Akberdin, T Kashapov, L Kiselev, S Kolmykov, Y Kondrakhin, ... Nucleic acids research 47 (W1), W225-W233, 2019 | 51 | 2019 |
| Rare Earth Elements Alter Redox Balance in Methylomicrobium alcaliphilum 20ZR IR Akberdin, DA Collins, R Hamilton, DY Oshchepkov, AK Shukla, ... Frontiers in microbiology 9, 2735, 2018 | 45 | 2018 |
| Metabolic model of central carbon and energy metabolisms of growing Arabidopsis thaliana in relation to sucrose translocation M Zakhartsev, I Medvedeva, Y Orlov, I Akberdin, O Krebs, WX Schulze BMC Plant Biology 16, 1-22, 2016 | 42 | 2016 |
| Muconic acid production from methane using rationally-engineered methanotrophic biocatalysts CA Henard, IR Akberdin, MG Kalyuzhnaya, MT Guarnieri Green Chemistry 21 (24), 6731-6737, 2019 | 38 | 2019 |
| Inheritance of litter size at birth in farmed arctic foxes (Alopex lagopus, Canidae, Carnivora) TI Axenovich, IV Zorkoltseva, IR Akberdin, SV Beketov, SN Kashtanov, ... Heredity 98 (2), 99-105, 2007 | 37 | 2007 |
| MAMMOTh: a new database for curated mathematical models of biomolecular systems F Kazantsev, I Akberdin, S Lashin, N Ree, V Timonov, A Ratushny, ... Journal of bioinformatics and computational biology 16 (01), 1740010, 2018 | 28 | 2018 |
| Pluripotency gene network dynamics: System views from parametric analysis IR Akberdin, NA Omelyanchuk, SI Fadeev, NE Leskova, EA Oschepkova, ... PLoS One 13 (3), e0194464, 2018 | 24 | 2018 |
| A new stochastic model for subgenomic hepatitis C virus replication considers drug resistant mutants NV Ivanisenko, EL Mishchenko, IR Akberdin, PS Demenkov, ... PloS one 9 (3), e91502, 2014 | 18 | 2014 |
| In Silico Cell: Challenges and Perspectives IR Akberdin, FV Kazantsev, TV Ermak, VS Timonov, TM Khlebodarova, ... Matematicheskaya biologiya i bioinformatika 8 (1), 295-315, 2013 | 16 | 2013 |
| A Modular Mathematical Model of Exercise-Induced Changes in Metabolism, Signaling, and Gene Expression in Human Skeletal Muscle IR Akberdin, IN Kiselev, SS Pintus, RN Sharipov, AY Vertyshev, ... International Journal of Molecular Sciences 22 (19), 10353, 2021 | 14 | 2021 |
| A delay differential equation approach to model the COVID-19 pandemic IN Kiselev, IR Akberdin, FA Kolpakov medRxiv, 2021.09. 01.21263002, 2021 | 12 | 2021 |
| Bergey’s Man. Syst J Pascual, KJ Huber, BU Foesel, JS Overmann Archaea Bact 1, 1-8, 2017 | 12* | 2017 |
| BioUML—Towards a universal research platform F Kolpakov, I Akberdin, I Kiselev, S Kolmykov, Y Kondrakhin, M Kulyashov, ... Nucleic Acids Research 50 (W1), W124-W131, 2022 | 11 | 2022 |
| A Genome-Scale Metabolic Model of 2,3-Butanediol Production by Thermophilic Bacteria Geobacillus icigianus M Kulyashov, SE Peltek, IR Akberdin Microorganisms 8 (7), 1002, 2020 | 11 | 2020 |
| A Modular Visual Model of Energy Metabolism in Human Skeletal Muscle IN Kiselev, IR Akberdin, AY Vertyshev, DV Popov, FA Kolpakov Mathematical Biology & Bioinformatics 14 (2), 373-392, 2019 | 11 | 2019 |
| Pyrophosphate-dependent enzymes in methanotrophs: new findings and views VN Khmelenina, ON Rozova, IR Akberdin, MG Kalyuzhnaya, ... Methane biocatalysis: paving the way to sustainability, 83-98, 2018 | 11 | 2018 |
| MGSmodeller–a computer system for reconstruction, calculation and analysis mathematical models of molecular genetic system FV Kazantsev, IR Akberdin, KD Bezmaternykh, SA Lashin, ... THE SIXTH INTERNATIONAL CONFERENCE ON BIOINFORMATICS OF GENOME REGULATION …, 2008 | 9 | 2008 |
| Physiologically based pharmacokinetic modeling of nanoparticle biodistribution: A review of existing models, simulation software, and data analysis tools EO Kutumova, IR Akberdin, IN Kiselev, RN Sharipov, VS Egorova, ... International Journal of Molecular Sciences 23 (20), 12560, 2022 | 8 | 2022 |
Fedor KolpakovBiosoft.RuVerified email at biosoft.ru
