| Gene-expression profiles and transcriptional regulatory pathways that underlie the identity and diversity of mouse tissue macrophages EL Gautier, T Shay, J Miller, M Greter, C Jakubzick, S Ivanov, J Helft, ... Nature immunology 13 (11), 1118-1128, 2012 | 1468 | 2012 |
| Variation in the human immune system is largely driven by non-heritable influences P Brodin, V Jojic, T Gao, S Bhattacharya, CJL Angel, D Furman, ... Cell 160 (1-2), 37-47, 2015 | 650 | 2015 |
| Deciphering the transcriptional network of the dendritic cell lineage JC Miller, BD Brown, T Shay, EL Gautier, V Jojic, A Cohain, G Pandey, ... Nature immunology 13 (9), 888, 2012 | 610 | 2012 |
| Systems analysis of sex differences reveals an immunosuppressive role for testosterone in the response to influenza vaccination D Furman, BP Hejblum, N Simon, V Jojic, CL Dekker, R Thiébaut, ... Proceedings of the National Academy of Sciences 111 (2), 869-874, 2014 | 377 | 2014 |
| Transcriptional profiling of stroma from inflamed and resting lymph nodes defines immunological hallmarks D Malhotra, AL Fletcher, J Astarita, V Lukacs-Kornek, P Tayalia, ... Nature immunology 13 (5), 499-510, 2012 | 348 | 2012 |
| A panoramic view of yeast noncoding RNA processing WT Peng, MD Robinson, S Mnaimneh, NJ Krogan, G Cagney, Q Morris, ... Cell 113 (7), 919-933, 2003 | 277 | 2003 |
| Transcriptional insights into the CD8+ T cell response to infection and memory T cell formation JA Best, DA Blair, J Knell, E Yang, V Mayya, A Doedens, ML Dustin, ... Nature immunology 14 (4), 404-412, 2013 | 252 | 2013 |
| Molecular definition of the identity and activation of natural killer cells NA Bezman, CC Kim, JC Sun, G Min-Oo, DW Hendricks, Y Kamimura, ... Nature immunology 13 (10), 1000-1009, 2012 | 224 | 2012 |
| Cytomegalovirus infection enhances the immune response to influenza D Furman, V Jojic, S Sharma, SS Shen-Orr, CJL Angel, ... Science translational medicine 7 (281), 281ra43-281ra43, 2015 | 215 | 2015 |
| Conservation and divergence in the transcriptional programs of the human and mouse immune systems T Shay, V Jojic, O Zuk, K Rothamel, D Puyraimond-Zemmour, T Feng, ... Proceedings of the National Academy of Sciences 110 (8), 2946-2951, 2013 | 215 | 2013 |
| The transcriptional landscape of αβ T cell differentiation M Mingueneau, T Kreslavsky, D Gray, T Heng, R Cruse, J Ericson, ... Nature immunology 14 (6), 619-632, 2013 | 195 | 2013 |
| Expression of specific inflammasome gene modules stratifies older individuals into two extreme clinical and immunological states D Furman, J Chang, L Lartigue, CR Bolen, F Haddad, B Gaudilliere, ... Nature medicine 23 (2), 174-184, 2017 | 180 | 2017 |
| Intrathymic programming of effector fates in three molecularly distinct γδ T cell subtypes K Narayan, KE Sylvia, N Malhotra, CC Yin, G Martens, T Vallerskog, ... Nature immunology 13 (5), 511-518, 2012 | 175 | 2012 |
| Identification of transcriptional regulators in the mouse immune system V Jojic, T Shay, K Sylvia, O Zuk, X Sun, J Kang, A Regev, D Koller Nature immunology 14 (6), 633-643, 2013 | 153 | 2013 |
| Apoptosis and other immune biomarkers predict influenza vaccine responsiveness D Furman, V Jojic, B Kidd, S Shen‐Orr, J Price, J Jarrell, T Tse, H Huang, ... Molecular systems biology 9 (1), 659, 2013 | 135 | 2013 |
| Research in computational molecular biology J Huang, Q Morris, B Frey Detecting microRNA targets by linking sequence, microRNA and gene expression …, 2006 | 126 | 2006 |
| Genovo: de novo assembly for metagenomes J Laserson, V Jojic, D Koller Journal of Computational Biology 18 (3), 429-443, 2011 | 125 | 2011 |
| Accelerated dual decomposition for MAP inference V Jojic, S Gould, D Koller ICML, 2010 | 123 | 2010 |
| Shared and distinct transcriptional programs underlie the hybrid nature of i NKT cells NR Cohen, PJ Brennan, T Shay, GF Watts, M Brigl, J Kang, MB Brenner Nature immunology 14 (1), 90-99, 2013 | 101 | 2013 |
| Transcriptomes of the B and T lineages compared by multiplatform microarray profiling MW Painter, S Davis, RR Hardy, D Mathis, C Benoist, ... The Journal of Immunology 186 (5), 3047-3057, 2011 | 96 | 2011 |
