Mikel Egaña Aranguren

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Robert StevensProfessor of Computer Science, Department of Computer Science, university of manchesterVerified email at manchester.ac.uk
Martin KuiperProfessor in Systems Biology, NTNU, NorwayVerified email at ntnu.no
Mark D WilkinsonBBVA-UPM Industry Chair on Biotechnology and Isaac Peral Distinguished Researcher, UPMVerified email at illuminae.com
De Baets BernardGhent UniversityVerified email at ugent.be
Uli SattlerProfessor, IMG, Department of Computer Science, University of ManchesterVerified email at cs.man.ac.uk
Michel DumontierDistinguished Professor of Data Science, Maastricht UniversityVerified email at maastrichtuniversity.nl
Matthew HorridgeStanford UniversityVerified email at stanford.edu
Alejandro Rodríguez González (ORCI...Universidad Politecnica de Madrid - Centro de Tecnología BiomédicaVerified email at upm.es
Phillip LordLecturer in Computing Science, Newcastle UniversityVerified email at newcastle.ac.uk
Sean BechhoferReader, School of Computer Science, University of ManchesterVerified email at manchester.ac.uk
Katy WolstencroftAssistant Professor, Bioinformatics, Leiden University, LIACS, NetherlandsVerified email at liacs.leidenuniv.nl
Marcos Egea CortinesUniversidad Politécnica de CartagenaVerified email at upct.es
Nathalie Aussenac-GillesCNRS Senior Researcher (DR2), IRIT (CNRS, Univ. Toulouse), TMBI (Univ. Toulouse), FranceVerified email at irit.fr
Luigi IannoneThe University of ManchesterVerified email at cs.man.ac.uk
Mark MusenProfessor of Biomedical Informatics Research, Stanford UniversityVerified email at stanford.edu
Natasha NoyGoogle Inc.Verified email at acm.org
Jonathan MortensenGraduate Student, Stanford UniversityVerified email at stanford.edu
Alison CallahanStanford UniversityVerified email at stanford.edu
Chris WroeHealth Informatician, BMJ GroupVerified email at bmjgroup.com
Carole GobleProfessor of Computer Science, University of ManchesterVerified email at cs.man.ac.uk

Mikel Egaña Aranguren

UPV/EHU

Verified email at ehu.eus - Homepage

Linked (Open) Data FAIR data Bioinformatics


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Using OWL to model biological knowledge R Stevens, ME Aranguren, K Wolstencroft, U Sattler, N Drummond, ... International Journal of Human-Computer Studies 65 (7), 583-594, 2007	125	2007
Quantitative evaluation of bias in PCR amplification and next-generation sequencing derived from metabarcoding samples M Pawluczyk, J Weiss, MG Links, M Egaña Aranguren, MD Wilkinson, ... Analytical and bioanalytical chemistry 407 (7), 1841-1848, 2015	103	2015
Ontology Design Patterns for bio-ontologies: a case study on the Cell Cycle Ontology ME Aranguren, E Antezana, M Kuiper, R Stevens BMC bioinformatics 9 (5), 1-13, 2008	102	2008
BioGateway: a semantic systems biology tool for the life sciences E Antezana, W Blondé, M Egaña, A Rutherford, R Stevens, B De Baets, ... BMC bioinformatics 10 (10), 1-15, 2009	91	2009
Evaluation of the OQuaRE framework for ontology quality A Duque-Ramos, JT Fernández-Breis, M Iniesta, M Dumontier, ... Expert Systems with Applications 40 (7), 2696-2703, 2013	71	2013
Understanding and using the meaning of statements in a bio-ontology: recasting the Gene Ontology in OWL ME Aranguren, S Bechhofer, P Lord, U Sattler, R Stevens BMC bioinformatics 8 (1), 1-13, 2007	64	2007
Applying ontology design patterns in bio-ontologies M Egaña, A Rector, R Stevens, E Antezana Knowledge Engineering: Practice and Patterns, 7-16, 2008	63	2008
The Cell Cycle Ontology: an application ontology for the representation and integrated analysis of the cell cycle process E Antezana, M Egaña, W Blondé, A Illarramendi, I Bilbao, B De Baets, ... Genome Biology 10 (5), 1-20, 2009	54	2009
Transforming the axiomisation of ontologies: The ontology pre-processor language ME Aranguren, R Stevens, E Antezana Nature Precedings, 1-1, 2009	52	2009
ONTO-PERL: an API for supporting the development and analysis of bio-ontologies E Antezana, M Egaña, B De Baets, M Kuiper, V Mironov Bioinformatics 24 (6), 885, 2008	34	2008
Ontology design patterns for the formalisation of biological ontologies ME Aranguren University of Manchester, 81, 2005	26	2005
A quality evaluation framework for bio-ontologies JT Fernandez-Breis, ME Aranguren, R Stevens Nature Precedings, 1-1, 2009	24	2009
Automatically exposing openlifedata via sadi semantic web services AR González, A Callahan, J Cruz-Toledo, A Garcia, M Egaña Aranguren, ... Journal of Biomedical Semantics 5 (1), 1-12, 2014	22	2014
Ontology Design Pattern Language Expressivity Requirements M Horridge, ME Aranguren, J Mortensen, M Musen, NF Noy WOP, 2012	22	2012
Augmenting the Expressivity of the Ontology Pre-Processor Language. L Iannone, ME Aranguren, AL Rector, R Stevens OWLED 432, 2008	20	2008
In situ migration of handcrafted ontologies to reason-able forms ME Aranguren, C Wroe, C Goble, R Stevens Data & knowledge engineering 66 (1), 147-162, 2008	17	2008
Enhanced reproducibility of SADI web service workflows with Galaxy and Docker MDW Mikel Egaña Aranguren GigaScience 4 (59), 2015	16	2015
Role and Application of Ontology Design Patterns in Bio-Ontologies MA Egana PQDT-Global, 2009	15*	2009
Executing SADI services in Galaxy ME Aranguren, AR González, MD Wilkinson Journal of biomedical semantics 5 (1), 1-11, 2014	12	2014
Structuring the life science resourceome for semantic systems biology: lessons from the BioGateway project. E Antezana, W Blondé, M Egana, A Rutherford, R Stevens, B De Baets, ... SWAT4LS, 2008	12	2008

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