Alessio Atzori
Alessio Atzori
Verified email at dsf.unica.it
Title
Cited by
Cited by
Year
Computer simulations of the activity of RND efflux pumps
AV Vargiu, VK Ramaswamy, G Malloci, I Malvacio, A Atzori, P Ruggerone
Research in microbiology 169 (7-8), 384-392, 2018
242018
Identification and characterization of carbapenem binding sites within the RND-transporter AcrB
A Atzori, VN Malviya, G Malloci, J Dreier, KM Pos, AV Vargiu, ...
Biochimica et Biophysica Acta (BBA)-Biomembranes 1861 (1), 62-74, 2019
162019
Exploring protein kinase conformation using swarm-enhanced sampling molecular dynamics
A Atzori, NJ Bruce, KK Burusco, B Wroblowski, P Bonnet, RA Bryce
Journal of chemical information and modeling 54 (10), 2764-2775, 2014
142014
Effect of sequence and stereochemistry reversal on p53 peptide mimicry
A Atzori, AE Baker, M Chiu, RA Bryce, P Bonnet
PLoS One 8 (7), e68723, 2013
112013
Base sequence specificity of counterion binding to DNA: what can MD simulations tell us?
A Atzori, S Liggi, A Laaksonen, M Porcu, AP Lyubartsev, G Saba, F Mocci
Canadian Journal of Chemistry 94 (12), 1181-1188, 2016
92016
Molecular interactions of cephalosporins with the deep binding pocket of the RND transporter AcrB
A Atzori, G Malloci, JD Prajapati, A Basciu, A Bosin, U Kleinekathöfer, ...
The Journal of Physical Chemistry B 123 (22), 4625-4635, 2019
82019
The challenge of intracellular antibiotic accumulation, a function of fluoroquinolone influx versus bacterial efflux
J Vergalli, A Atzori, J Pajovic, E Dumont, G Malloci, M Masi, AV Vargiu, ...
Communications biology 3 (1), 1-12, 2020
72020
Discovery of Highly Selective Inhibitors of Calmodulin-Dependent Kinases That Restore Insulin Sensitivity in the Diet-Induced Obesity in Vivo Mouse Model
C Fromont, A Atzori, D Kaur, L Hashmi, G Greco, A Cabanillas, ...
Journal of medicinal chemistry 63 (13), 6784-6801, 2020
32020
Molecular interactions of carbapenem antibiotics with the multidrug efflux transporter AcrB of Escherichia coli
A Atzori, G Malloci, F Cardamone, A Bosin, AV Vargiu, P Ruggerone
International journal of molecular sciences 21 (3), 860, 2020
32020
Predictive Rules of Efflux Inhibition and Avoidance in Pseudomonas aeruginosa
J Mehla, G Malloci, R Mansbach, CA Lˇpez, R Tsivkovski, K Haynes, ...
Mbio 12 (1), e02785-20, 2021
22021
Molecular Dynamics Investigations on Base Sequence Specificity of Counterion Binding to DNA
A Atzori, S Liggi, A Laaksonen, A Lyubartsev, G Saba, M Porcu, F Mocci
Biophysical Journal 102 (3), 637a, 2012
12012
Characterization and identification of Ampicillin and Amoxicillin binding sites within the multidrug transporter MexB of P. Aeruginosa
F CARDAMONE, A ATZORI, A BOSIN, G SERRA, A Vittorio
EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 48, S198-S198, 2019
2019
Molecular dynamics of R-spondin 1: Conformation and druggability analysis
R Chikhale, K Burusco-Goni, A Atzori, R Bryce
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 256, 2018
2018
Computational Study of the Interaction between Antimicrobial Compounds and Efflux Systems of Gram-Negative Bacteria
A Atzori, AV Vargiu, G Malloci, P Ruggerone
Biophysical Journal 112 (3), 274a, 2017
2017
Conformational analysis of peptides and proteins for drug design using molecular simulations
A Atzori
PQDT-UK & Ireland, 2015
2015
Affinity sites in E. coli transporters: structural and dynamical features
AV Vargiu, A Atzori, VR Krishnan, G Malloci, P Ruggerone
Binding of antibiotics to the multi-drug efflux transporter AcrB of E. coli investigated by molecular modeling
G Malloci, VK Ramaswamy, A Atzori, G Serra, A Bosin, AV Vargiu, ...
Water and ion parameters effects on the base sequence specificity of ion binding to DNA in MD simulations
A Atzori, M Porcu, S Liggi, A Laaksonen, A Lyubartsev, G Saba, F Mocci
INTERMOLECULAR INTERACTIONS IN CRYSTALS: VIA EXPERIMENT AND THEORY TOá…, 0
Exploring protein kinase conformation using swarm-enhanced sampling molec-ular dynamics (sesMD)
A Atzori, NJ Bruce, KK Burusco, B Wroblowski, P Bonnet, RA Bryce
Wednesday, February 29, 2012 637a
A Atzori, S Liggi, A Laaksonen, A Lyubartsev, G Saba, M Porcu, F Mocci
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Articles 1–20