David Chagné

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Susan E GardinerHonorary Research Fellow, NZ Institute for Plant & Food Research (PFR)Verified email at plantandfood.co.nz
Ross CrowhurstThe New Zealand Institute for Plant and Food Research LtdVerified email at plantandfood.co.nz
riccardo velascoDirector of the Viticulture and Enology Center, CREA VEVerified email at crea.gov.it
Andrew AllanSchool of Biological Sciences, University of Auckland, and Plant and Food ResearchVerified email at plantandfood.co.nz
Vincent BusVerified email at plantandfood.co.nz
Richard V EspleyScientiest Plant & Food ResearchVerified email at plantandfood.co.nz
Cecilia DengNew Cultivar Innovation, The New Zealand Institute for Plant and Food Research LtdVerified email at plantandfood.co.nz
Christophe PlomionINRAE, Univ. Bordeaux, BIOGECOVerified email at inrae.fr
Stuart TustinNew Zealand Institute for Plant & Food Research LtdVerified email at plantandfood.co.nz
Nahla BassilUSDA ARS NCGRVerified email at usda.gov
Alessandro Cestarofondazione Edmund MachVerified email at fmach.it
Claudia WiedowGeneticistVerified email at plantandfood.co.nz
Robert J. SchafferPlant and Food Research, University of Auckland, Michigan State University, John Innes CentreVerified email at plantandfood.co.nz
Baptiste GuittonUMR AGAP - CIRADVerified email at cirad.fr
Daryl RowanScience Group Leader, NZ Institute for Plant and Food Research LimitedVerified email at plantandfood.co.nz
Charles-Eric DurelScientist, INRA, FranceVerified email at angers.inra.fr
Mareike KnäbelScientist The New Zealand Institute for Plant & Food Research LimitedVerified email at plantandfood.co.nz
Evelyne CostesINRAEVerified email at inrae.fr
Jill BushakraPost-Doctoral Research Assoc.Verified email at ars.usda.gov
Toshi FosterSenior Scientist, Plant and Food ResearchVerified email at plantandfood.co.nz

David Chagné

The New Zealand Institute for Plant & Food Research Ltd (Plant & Food Research)

Verified email at plantandfood.co.nz - Homepage

Plant genetics breeding and genomics


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The genome of the domesticated apple (Malus × domestica Borkh.) R Velasco, A Zharkikh, J Affourtit, A Dhingra, A Cestaro, A Kalyanaraman, ... Nature genetics 42 (10), 833-839, 2010	2212	2010
Multiple repeats of a promoter segment causes transcription factor autoregulation in red apples RV Espley, C Brendolise, D Chagne, S Kutty-Amma, S Green, R Volz, ... The Plant Cell 21 (1), 168-183, 2009	477	2009
High temperature reduces apple fruit colour via modulation of the anthocyanin regulatory complex KUI Lin‐Wang, D Micheletti, J Palmer, R Volz, L Lozano, R Espley, ... Plant, Cell & Environment 34 (7), 1176-1190, 2011	354	2011
Genome-wide SNP detection, validation, and development of an 8K SNP array for apple D Chagné, RN Crowhurst, M Troggio, MW Davey, B Gilmore, C Lawley, ... PloS one 7 (2), e31745, 2012	328	2012
An ancient duplication of apple MYB transcription factors is responsible for novel red fruit-flesh phenotypes D Chagné, K Lin-Wang, RV Espley, RK Volz, NM How, S Rouse, ... Plant physiology 161 (1), 225-239, 2013	276	2013
The draft genome sequence of European pear (Pyrus communis L.‘Bartlett’) D Chagné, RN Crowhurst, M Pindo, A Thrimawithana, C Deng, H Ireland, ... PloS one 9 (4), e92644, 2014	261	2014
Cross-species transferability and mapping of genomic and cDNA SSRs in pines D Chagné, P Chaumeil, A Ramboer, C Collada, A Guevara, MT Cervera, ... Theoretical and Applied Genetics 109, 1204-1214, 2004	248	2004
Genomic selection for fruit quality traits in apple (Malus× domestica Borkh.) S Kumar, D Chagné, MCAM Bink, RK Volz, C Whitworth, C Carlisle PloS one 7 (5), e36674, 2012	243	2012
Mapping a candidate gene (MdMYB10) for red flesh and foliage colour in apple D Chagné, CM Carlisle, C Blond, RK Volz, CJ Whitworth, NC Oraguzie, ... BMC genomics 8 (1), 1-11, 2007	243	2007
Development and Validation of a 20K Single Nucleotide Polymorphism (SNP) Whole Genome Genotyping Array for Apple (Malus × domestica Borkh) L Bianco, A Cestaro, DJ Sargent, E Banchi, S Derdak, M Di Guardo, ... PloS one 9 (10), e110377, 2014	225	2014
Analysis of expressed sequence tags from Actinidia: applications of a cross species EST database for gene discovery in the areas of flavor, health, color and ripening RN Crowhurst, AP Gleave, EA MacRae, C Ampomah-Dwamena, ... BMC genomics 9 (1), 1-26, 2008	223	2008
Construction of a dense genetic linkage map for apple rootstocks using SSRs developed from Malus ESTs and Pyrus genomic sequences JM Celton, DS Tustin, D Chagné, SE Gardiner Tree Genetics & Genomes 5 (1), 93-107, 2009	198	2009
Development of a set of SNP markers present in expressed genes of the apple D Chagné, K Gasic, RN Crowhurst, Y Han, HC Bassett, DR Bowatte, ... Genomics 92 (5), 353-358, 2008	197	2008
Genetic diversity within and among Pinus pinaster populations: comparison between AFLP and microsatellite markers S Mariette, D Chagné, C Lézier, P Pastuszka, A Raffin, C Plomion, ... Heredity 86 (4), 469-479, 2001	185	2001
A genomics approach to understanding the role of auxin in apple (Malus x domestica) fruit size control F Devoghalaere, T Doucen, B Guitton, J Keeling, W Payne, TJ Ling, ... BMC Plant Biology 12 (1), 1-15, 2012	173	2012
Genetic control of biennial bearing in apple B Guitton, JJ Kelner, R Velasco, SE Gardiner, D Chagne, E Costes Journal of experimental botany 63 (1), 131-149, 2012	156	2012
Novel genomic approaches unravel genetic architecture of complex traits in apple S Kumar, DJ Garrick, MCAM Bink, C Whitworth, D Chagné, RK Volz BMC genomics 14, 1-13, 2013	141	2013
Towards genomic selection in apple (Malus × domestica Borkh.) breeding programmes: Prospects, challenges and strategies S Kumar, MCAM Bink, RK Volz, VGM Bus, D Chagné Tree Genetics & Genomes 8, 1-14, 2012	132	2012
Genome mapping of three major resistance genes to woolly apple aphid (Eriosoma lanigerum Hausm.) VGM Bus, D Chagné, HCM Bassett, D Bowatte, F Calenge, JM Celton, ... Tree Genetics & Genomes 4, 223-236, 2008	131	2008
Rights, interests and expectations: Indigenous perspectives on unrestricted access to genomic data M Hudson, NA Garrison, R Sterling, NR Caron, K Fox, J Yracheta, ... Nature Reviews Genetics 21 (6), 377-384, 2020	129	2020

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