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Xiaoyu Zhang
Xiaoyu Zhang
Plant Biology, University of Georgia
Verified email at uga.edu
Title
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Cited by
Year
Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning
SJ Cokus, S Feng, X Zhang, Z Chen, B Merriman, CD Haudenschild, ...
Nature 452 (7184), 215, 2008
25012008
Genome-wide High-Resolution Mapping and Functional Analysis of DNA Methylation in Arabidopsis
X Zhang, J Yazaki, A Sundaresan, S Cokus, SWL Chan, H Chen, ...
Cell 126 (6), 1189-1201, 2006
20162006
Methylation of tRNAAsp by the DNA methyltransferase homolog Dnmt2
MG Goll, F Kirpekar, KA Maggert, JA Yoder, CL Hsieh, X Zhang, KG Golic, ...
Science 311 (5759), 395-398, 2006
14132006
Conservation and divergence of methylation patterning in plants and animals
S Feng, SJ Cokus, X Zhang, PY Chen, M Bostick, MG Goll, J Hetzel, J Jain, ...
Proceedings of the National Academy of Sciences 107 (19), 8689-8694, 2010
13202010
Relationship between nucleosome positioning and DNA methylation
RK Chodavarapu, S Feng, YV Bernatavichute, PY Chen, H Stroud, Y Yu, ...
Nature 466 (7304), 388, 2010
8352010
Whole-genome analysis of histone H3 lysine 27 trimethylation in Arabidopsis
X Zhang, O Clarenz, S Cokus, YV Bernatavichute, M Pellegrini, ...
PLoS biology 5 (5), e129, 2007
8142007
Dissecting Arabidopsis thaliana DICER function in small RNA processing, gene silencing and DNA methylation patterning
IR Henderson, X Zhang, C Lu, L Johnson, BC Meyers, PJ Green, ...
Nature genetics 38 (6), 721, 2006
6942006
The Amborella genome and the evolution of flowering plants
VA Albert, WB Barbazuk, JP Der, J Leebens-Mack, H Ma, JD Palmer, ...
Science 342 (6165), 1241089, 2013
6802013
Pack-MULE transposable elements mediate gene evolution in plants
N Jiang, Z Bao, X Zhang, SR Eddy, SR Wessler
Nature 431 (7008), 569, 2004
6312004
Genome-wide analysis of mono-, di-and trimethylation of histone H3 lysine 4 in Arabidopsis thaliana
X Zhang, YV Bernatavichute, S Cokus, M Pellegrini, SE Jacobsen
Genome biology 10 (6), R62, 2009
6112009
An active DNA transposon family in rice
N Jiang, Z Bao, X Zhang, H Hirochika, SR Eddy, SR McCouch, ...
Nature 421 (6919), 163, 2003
5382003
The SRA methyl-cytosine-binding domain links DNA and histone methylation
LM Johnson, M Bostick, X Zhang, E Kraft, I Henderson, J Callis, ...
Current Biology 17 (4), 379-384, 2007
4462007
Genome-wide association of histone H3 lysine nine methylation with CHG DNA methylation in Arabidopsis thaliana
YV Bernatavichute, X Zhang, S Cokus, M Pellegrini, SE Jacobsen
PloS one 3 (9), e3156, 2008
3942008
The Arabidopsis LHP1 protein colocalizes with histone H3 Lys27 trimethylation
X Zhang, S Germann, BJ Blus, S Khorasanizadeh, V Gaudin, ...
Nature Structural and Molecular Biology 14 (9), 869, 2007
3572007
Role of RNA polymerase IV in plant small RNA metabolism
X Zhang, IR Henderson, C Lu, PJ Green, SE Jacobsen
Proceedings of the National Academy of Sciences 104 (11), 4536-4541, 2007
3212007
CHH islands: de novo DNA methylation in near-gene chromatin regulation in maize
JI Gent, NA Ellis, L Guo, AE Harkess, Y Yao, X Zhang, RK Dawe
Genome research 23 (4), 628-637, 2013
3182013
The functional topography of the Arabidopsis genome is organized in a reduced number of linear motifs of chromatin states
J Sequeira-Mendes, I Aragüez, R Peiró, R Mendez-Giraldez, X Zhang, ...
The Plant Cell 26 (6), 2351-2366, 2014
2952014
On the origin and evolutionary consequences of gene body DNA methylation
AJ Bewick, L Ji, CE Niederhuth, EM Willing, BT Hofmeister, X Shi, L Wang, ...
Proceedings of the National Academy of Sciences 113 (32), 9111-9116, 2016
2872016
Miniature inverted-repeat transposable elements and their relationship to established DNA transposons
C Feschotte, X Zhang, SR Wessler
Mobile DNA II, 1147-1158, 2002
2712002
RNAi, DRD1, and histone methylation actively target developmentally important non-CG DNA methylation in Arabidopsis
SWL Chan, IR Henderson, X Zhang, G Shah, JSC Chien, SE Jacobsen
PLoS genetics 2 (6), e83, 2006
2622006
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