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Andrew Lonie
Andrew Lonie
Director, Australian Bioinformatics Commons, University of Melbourne
Verified email at unimelb.edu.au - Homepage
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Year
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update
E Afgan, D Baker, B Batut, M Van Den Beek, D Bouvier, M Čech, J Chilton, ...
Nucleic acids research 46 (W1), W537-W544, 2018
37082018
Whole–genome characterization of chemoresistant ovarian cancer
AM Patch, EL Christie, D Etemadmoghadam, DW Garsed, J George, ...
Nature 521 (7553), 489-494, 2015
14672015
THE α-1, 3-GALACTOSYLTRANSFERASE KNOCKOUT MOUSE: Implications for Xenotransplantation: 1
RG Tearle, MJ Tange, ZL Zannettino, M Katerelos, TA Shinkel, ...
Transplantation 61 (1), 13-19, 1996
3951996
Tracking the origins and drivers of subclonal metastatic expansion in prostate cancer
MKH Hong, G Macintyre, DC Wedge, P Van Loo, K Patel, S Lunke, ...
Nature communications 6 (1), 6605, 2015
3942015
Rare mutations in XRCC2 increase the risk of breast cancer
DJ Park, F Lesueur, T Nguyen-Dumont, M Pertesi, F Odefrey, F Hammet, ...
The American Journal of Human Genetics 90 (4), 734-739, 2012
2182012
Molecular characterisation of the Polycomblike gene of Drosophila melanogaster, a trans-acting negative regulator of homeotic gene expression
A Lonie, R D’Andrea, R Paro, R Saint
Development 120 (9), 2629-2636, 1994
1711994
Genomics virtual laboratory: a practical bioinformatics workbench for the cloud
E Afgan, C Sloggett, N Goonasekera, I Makunin, D Benson, M Crowe, ...
PloS one 10 (10), e0140829, 2015
1222015
Epigenome-wide methylation in DNA from peripheral blood as a marker of risk for breast cancer
G Severi, MC Southey, DR English, C Jung, A Lonie, C McLean, ...
Breast cancer research and treatment 148, 665-673, 2014
1142014
Cpipe: a shared variant detection pipeline designed for diagnostic settings
SP Sadedin, H Dashnow, PA James, M Bahlo, DC Bauer, A Lonie, ...
Genome medicine 7, 1-10, 2015
962015
Digital forensic readiness: Expert perspectives on a theoretical framework
M Elyas, A Ahmad, SB Maynard, A Lonie
Computers & Security 52, 70-89, 2015
902015
Towards a systemic framework for digital forensic readiness
M Elyas, SB Maynard, A Ahmad, A Lonie
Journal of Computer Information Systems 54 (3), 97-105, 2014
792014
Investigating reproducibility and tracking provenance–a genomic workflow case study
S Kanwal, FZ Khan, A Lonie, RO Sinnott
BMC bioinformatics 18, 1-14, 2017
772017
Sharing interoperable workflow provenance: A review of best practices and their practical application in CWLProv
FZ Khan, S Soiland-Reyes, RO Sinnott, A Lonie, C Goble, MR Crusoe
GigaScience 8 (11), giz095, 2019
702019
Domain ontology driven data mining: a medical case study
YT Kuo, A Lonie, L Sonenberg, K Paizis
Proceedings of the 2007 international workshop on Domain driven data mining …, 2007
632007
Rare Mutations in RINT1 Predispose Carriers to Breast and Lynch Syndrome–Spectrum Cancers
DJ Park, K Tao, F Le Calvez-Kelm, T Nguyen-Dumont, N Robinot, ...
Cancer discovery 4 (7), 804-815, 2014
592014
Targeting gene expression to endothelium in transgenic animals: a comparison of the human ICAM‐2, PECAM‐1 and endoglin promoters
PJ Cowan, TA Shinkel, N Fisicaro, JW Godwin, C Bernabéu, N Almendro, ...
Xenotransplantation 10 (3), 223-231, 2003
542003
Identification of G protein-coupled receptors in Schistosoma haematobium and S. mansoni by comparative genomics
TDL Campos, ND Young, PK Korhonen, RS Hall, S Mangiola, A Lonie, ...
Parasites & vectors 7, 1-11, 2014
422014
High‐level co‐expression of complement regulators on vascular endothelium in transgenic mice: CD55 and CD59 provide greater protection from human complement‐mediated injury …
PJ Cowan, TA Shinkel, A Aminian, M Romanella, PL Wigley, AJ Lonie, ...
Xenotransplantation 5 (3), 184-190, 1998
421998
Genome-wide measures of DNA methylation in peripheral blood and the risk of urothelial cell carcinoma: a prospective nested case–control study
PA Dugue, MT Brinkman, RL Milne, EM Wong, LM FitzGerald, JK Bassett, ...
British journal of cancer 115 (6), 664-673, 2016
332016
Genome‐wide measures of peripheral blood Dna methylation and prostate cancer risk in a prospective nested case‐control study
LM FitzGerald, H Naeem, E Makalic, DF Schmidt, JG Dowty, JE Joo, ...
The Prostate 77 (5), 471-478, 2017
312017
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