MODOMICS: a database of RNA modification pathways. 2021 update P Boccaletto, F Stefaniak, A Ray, A Cappannini, S Mukherjee, E Purta, ... Nucleic acids research 50 (D1), D231-D235, 2022 | 453 | 2022 |
Molecularly Imprinted Polymer (MIP) Film with Improved Surface Area Developed by Using Metal-Organic Framework (MOF) for Sensitive Lipocalin (NGAL) Determination. Z Iskierko, PS Sharma, D Prochowicz, K Fronc, F D'Souza, ... ACS Appl. Mater. Interfaces 8, 19860-19865, 2016 | 74 | 2016 |
Structural bases of peptidoglycan recognition by lysostaphin SH3b domain P Mitkowski, E Jagielska, E Nowak, JM Bujnicki, F Stefaniak, D Niedziałek, ... Scientific reports 9 (1), 5965, 2019 | 65 | 2019 |
AnnapuRNA: A scoring function for predicting RNA-small molecule binding poses F Stefaniak, JM Bujnicki PLoS computational biology 17 (2), e1008309, 2021 | 46 | 2021 |
Prediction of compounds activity in nuclear receptor signaling and stress pathway assays using machine learning algorithms and low dimensional molecular descriptors F Stefaniak Frontiers in Environmental Science 3, 77-84, 2015 | 35 | 2015 |
RNArchitecture: a database and a classification system of RNA families, with a focus on structural information P Boccaletto, M Magnus, C Almeida, A Żyła, A Astha, R Pluta, B Bagiński, ... Nucleic Acids Research 46 (D1), D202-D205, 2018 | 30 | 2018 |
Development of dual chitinase inhibitors as potential new treatment for respiratory system diseases M Mazur, B Dymek, R Koralewski, P Sklepkiewicz, S Olejniczak, ... Journal of Medicinal Chemistry 62 (15), 7126-7145, 2019 | 26 | 2019 |
Senza titolo WO Patent 2014024125:A1, 0 | 26* | |
MODOMICS: a database of RNA modifications and related information. 2023 update A Cappannini, A Ray, E Purta, S Mukherjee, P Boccaletto, SN Moafinejad, ... Nucleic Acids Research 52 (D1), D239-D244, 2024 | 23 | 2024 |
Synthesis and characterization of novel classes of PDE10A inhibitors-1H-1, 3-benzodiazoles and imidazo [1, 2-a] pyrimidines R Moszczyński-Pętkowski, J Majer, M Borkowska, Ł Bojarski, S Janowska, ... European Journal of Medicinal Chemistry 155, 96-116, 2018 | 23 | 2018 |
Human RNA cap1 methyltransferase CMTr1 cooperates with RNA helicase DHX15 to modify RNAs with highly structured 5′ termini D Toczydlowska-Socha, MM Zielinska, M Kurkowska, Astha, CF Almeida, ... Philosophical Transactions of the Royal Society B: Biological Sciences 373 …, 2018 | 19 | 2018 |
Modeling of ribonucleic acid–ligand interactions F Stefaniak, EI Chudyk, M Bodkin, WK Dawson, JM Bujnicki Wiley Interdisciplinary Reviews: Computational Molecular Science 5 (6), 425-439, 2015 | 16 | 2015 |
RNAProbe: a web server for normalization and analysis of RNA structure probing data TK Wirecki, K Merdas, A Bernat, MJ Boniecki, JM Bujnicki, F Stefaniak Nucleic Acids Research 48 (W1), W292-W299, 2020 | 15 | 2020 |
Novel inhibitors of the rRNA ErmC'methyltransferase to block resistance to macrolides, lincosamides, streptogramine B antibiotics IP Foik, I Tuszynska, M Feder, E Purta, F Stefaniak, JM Bujnicki European Journal of Medicinal Chemistry 146, 60-67, 2018 | 13 | 2018 |
Discovery of selective, orally bioavailable inhibitor of mouse chitotriosidase M Mazur, A Bartoszewicz, B Dymek, M Salamon, G Andryianau, ... Bioorganic & medicinal chemistry letters 28 (3), 310-314, 2018 | 13 | 2018 |
Benzoxazepine-derived selective, orally bioavailable inhibitor of human acidic mammalian chitinase G Andryianau, M Kowalski, MC Piotrowicz, AA Rajkiewicz, B Dymek, ... ACS Medicinal Chemistry Letters 11 (6), 1228-1235, 2020 | 12 | 2020 |
fingeRNAt—A novel tool for high-throughput analysis of nucleic acid-ligand interactions NA Szulc, Z Mackiewicz, JM Bujnicki, F Stefaniak PLoS Computational Biology 18 (6), e1009783, 2022 | 11 | 2022 |
Luciferase reporter assay for small-molecule inhibitors of MIR92b-3p function: screening cyanopeptolins produced by Nostoc from the Baltic Sea P Brzuzan, H Mazur-Marzec, M Florczyk, F Stefaniak, A Fidor, R Konkel, ... Toxicology in Vitro 68, 104951, 2020 | 9 | 2020 |
Discovery of TRAF-2 and NCK-interacting kinase (TNIK) inhibitors by ligand-based virtual screening methods A Bujak, F Stefaniak, D Zdzalik, P Grygielewicz, B Dymek, M Zagozda, ... MedChemComm 6 (8), 1564-1572, 2015 | 7 | 2015 |
RNA tertiary structure prediction in CASP15 by the GeneSilico group: Folding simulations based on statistical potentials and spatial restraints EF Baulin, S Mukherjee, SN Moafinejad, TK Wirecki, NG Badepally, ... Proteins: Structure, Function, and Bioinformatics 91 (12), 1800-1810, 2023 | 4 | 2023 |