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Steffen Klamt
Steffen Klamt
Max Planck Institute for Dynamics of Complex Technical Systems, Magdeburg
Verified email at mpi-magdeburg.mpg.de
Title
Cited by
Cited by
Year
Metabolic network structure determines key aspects of functionality and regulation
J Stelling, S Klamt, K Bettenbrock, S Schuster, ED Gilles
Nature 420 (6912), 190-193, 2002
10042002
Structural and functional analysis of cellular networks with CellNetAnalyzer
S Klamt, J Saez-Rodriguez, ED Gilles
BMC systems biology 1, 1-13, 2007
6562007
Hypergraphs and cellular networks
S Klamt, UU Haus, F Theis
PLoS computational biology 5 (5), e1000385, 2009
5832009
Comparison of network-based pathway analysis methods
JA Papin, J Stelling, ND Price, S Klamt, S Schuster, BO Palsson
Trends in biotechnology 22 (8), 400-405, 2004
4972004
A methodology for the structural and functional analysis of signaling and regulatory networks
S Klamt, J Saez-Rodriguez, JA Lindquist, L Simeoni, ED Gilles
BMC bioinformatics 7, 1-26, 2006
4912006
Discrete logic modelling as a means to link protein signalling networks with functional analysis of mammalian signal transduction
J Saez‐Rodriguez, LG Alexopoulos, J Epperlein, R Samaga, ...
Molecular systems biology 5 (1), 331, 2009
4052009
A logical model provides insights into T cell receptor signaling
J Saez-Rodriguez, L Simeoni, JA Lindquist, R Hemenway, U Bommhardt, ...
PLoS computational biology 3 (8), e163, 2007
4032007
Two approaches for metabolic pathway analysis?
S Klamt, J Stelling
Trends in biotechnology 21 (2), 64-69, 2003
3822003
MEMOTE for standardized genome-scale metabolic model testing
C Lieven, ME Beber, BG Olivier, FT Bergmann, M Ataman, P Babaei, ...
Nature biotechnology 38 (3), 272-276, 2020
3582020
Minimal cut sets in biochemical reaction networks
S Klamt, ED Gilles
Bioinformatics 20 (2), 226-234, 2004
3512004
Computation of elementary modes: a unifying framework and the new binary approach
J Gagneur, S Klamt
BMC bioinformatics 5, 1-21, 2004
3502004
Combinatorial complexity of pathway analysis in metabolic networks
S Klamt, J Stelling
Molecular biology reports 29, 233-236, 2002
3122002
FluxAnalyzer: exploring structure, pathways, and flux distributions in metabolic networks on interactive flux maps
S Klamt, J Stelling, M Ginkel, ED Gilles
Bioinformatics 19 (2), 261-269, 2003
2962003
Transforming Boolean models to continuous models: methodology and application to T-cell receptor signaling
DM Wittmann, J Krumsiek, J Saez-Rodriguez, DA Lauffenburger, S Klamt, ...
BMC systems biology 3, 1-21, 2009
2722009
GSMN-TB: a web-based genome-scale network model of Mycobacterium tuberculosismetabolism
DJV Beste, T Hooper, G Stewart, B Bonde, C Avignone-Rossa, ...
Genome biology 8, 1-18, 2007
2532007
The logic of EGFR/ErbB signaling: theoretical properties and analysis of high-throughput data
R Samaga, J Saez-Rodriguez, LG Alexopoulos, PK Sorger, S Klamt
PLoS computational biology 5 (8), e1000438, 2009
2392009
SBML Level 3: an extensible format for the exchange and reuse of biological models
SM Keating, D Waltemath, M König, F Zhang, A Dräger, C Chaouiya, ...
Molecular systems biology 16 (8), e9110, 2020
2152020
SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools
C Chaouiya, D Bérenguier, SM Keating, A Naldi, MP Van Iersel, ...
BMC systems biology 7, 1-15, 2013
1912013
Model-based metabolic engineering enables high yield itaconic acid production by Escherichia coli
BJ Harder, K Bettenbrock, S Klamt
Metabolic engineering 38, 29-37, 2016
1752016
Calculability analysis in underdetermined metabolic networks illustrated by a model of the central metabolism in purple nonsulfur bacteria
S Klamt, S Schuster, ED Gilles
Biotechnology and bioengineering 77 (7), 734-751, 2002
1602002
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Articles 1–20