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Alexey Gavrilov
Alexey Gavrilov
Institute of Gene Biology
No verified email
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Cited by
Year
Active chromatin and transcription play a key role in chromosome partitioning into topologically associating domains
SV Ulianov, EE Khrameeva, AA Gavrilov, IM Flyamer, P Kos, ...
Genome research 26 (1), 70-84, 2016
3732016
Chromosome conformation capture (from 3C to 5C) and its ChIP-based modification
A Gavrilov, E Eivazova, I Pirozhkova, M Lipinski, S Razin, Y Vassetzky
Chromatin Immunoprecipitation Assays: Methods and Protocols, 171-188, 2009
1052009
Disclosure of a structural milieu for the proximity ligation reveals the elusive nature of an active chromatin hub
AA Gavrilov, ES Gushchanskaya, O Strelkova, O Zhironkina, II Kireev, ...
Nucleic acids research, 2013
1022013
Nuclear lamina integrity is required for proper spatial organization of chromatin in Drosophila
SV Ulianov, SA Doronin, EE Khrameeva, PI Kos, AV Luzhin, SS Starikov, ...
Nature communications 10 (1), 1176, 2019
1012019
Transcription factories in the context of the nuclear and genome organization
SV Razin, AA Gavrilov, A Pichugin, M Lipinski, OV Iarovaia, YS Vassetzky
Nucleic acids research 39 (21), 9085-9092, 2011
802011
Chromatin without the 30-nm fiber: Constrained disorder instead of hierarchical folding
SV Razin, AA Gavrilov
epigenetics 9 (5), 653-657, 2014
792014
In vivo formaldehyde cross-linking: it is time for black box analysis
A Gavrilov, SV Razin, G Cavalli
Briefings in functional genomics 14 (2), 163-165, 2015
772015
Suppression of liquid–liquid phase separation by 1, 6-hexanediol partially compromises the 3D genome organization in living cells
SV Ulianov, AK Velichko, MD Magnitov, AV Luzhin, AK Golov, ...
Nucleic acids research 49 (18), 10524-10541, 2021
752021
Spatial configuration of the chicken α-globin gene domain: immature and active chromatin hubs
AA Gavrilov, SV Razin
Nucleic acids research 36 (14), 4629-4640, 2008
662008
Communication of genome regulatory elements in a folded chromosome
SV Razin, AA Gavrilov, ES Ioudinkova, OV Iarovaia
FEBS letters 587 (13), 1840-1847, 2013
652013
Identification of c-Myb Target Genes in K562 Cells Reveals a Role for c-Myb as a Master Regulator
PI Lorenzo, EM Brendeford, S Gilfillan, AA Gavrilov, M Leedsak, SV Razin, ...
Genes & Cancer 2 (8), 805-817, 2011
522011
Order and stochasticity in the folding of individual Drosophila genomes
SV Ulianov, VV Zakharova, AA Galitsyna, PI Kos, KE Polovnikov, ...
Nature communications 12 (1), 41, 2021
512021
Nuclear compartments, genome folding, and enhancer-promoter communication
SV Ulianov, AA Gavrilov, SV Razin
International review of cell and molecular biology 315, 183-244, 2015
512015
A CTCF-dependent silencer located in the differentially methylated area may regulate expression of a housekeeping gene overlapping a tissue-specific gene domain
D Klochkov, H Rincón-Arano, ES Ioudinkova, V Valadez-Graham, ...
Molecular and cellular biology 26 (5), 1589-1597, 2006
502006
CRISPR/Cas9-generated mouse model of Duchenne muscular dystrophy recapitulating a newly identified large 430 kb deletion in the human DMD gene
TV Egorova, ED Zotova, DA Reshetov, AV Polikarpova, SG Vassilieva, ...
Disease models & mechanisms 12 (4), dmm037655, 2019
422019
The role of liquid–liquid phase separation in the compartmentalization of cell nucleus and spatial genome organization
SV Razin, AA Gavrilov
Biochemistry (Moscow) 85, 643-650, 2020
412020
Studying RNA–DNA interactome by Red-C identifies noncoding RNAs associated with various chromatin types and reveals transcription dynamics
AA Gavrilov, AA Zharikova, AA Galitsyna, AV Luzhin, NM Rubanova, ...
Nucleic acids research 48 (12), 6699-6714, 2020
362020
Actual Ligation Frequencies in the Chromosome Conformation Capture Procedure
AA Gavrilov, AK Golov, SV Razin
PloS one 8 (3), e60403, 2013
312013
Chromatin Immunoprecipitation Assays
A Gavrilov, E Eivazova
Methods in Molecular Biology 567 (1), 171-188, 2009
31*2009
Quantitative analysis of genomic element interactions by molecular colony technique
AA Gavrilov, HV Chetverina, ES Chermnykh, SV Razin, AB Chetverin
Nucleic acids research 42 (5), e36-e36, 2014
302014
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Articles 1–20