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Efthymia Papalexi
Efthymia Papalexi
Senior Scientist at Parse Biosciences
Verified email at nyu.edu
Title
Cited by
Cited by
Year
Comprehensive integration of single-cell data
T Stuart, A Butler, P Hoffman, C Hafemeister, E Papalexi, WM Mauck, ...
cell 177 (7), 1888-1902. e21, 2019
104262019
Integrating single-cell transcriptomic data across different conditions, technologies, and species
A Butler, P Hoffman, P Smibert, E Papalexi, R Satija
Nature biotechnology 36 (5), 411-420, 2018
87672018
Integrated analysis of multimodal single-cell data
Y Hao, S Hao, E Andersen-Nissen, WM Mauck, S Zheng, A Butler, MJ Lee, ...
Cell 184 (13), 3573-3587. e29, 2021
67572021
Single-cell RNA sequencing to explore immune cell heterogeneity
E Papalexi, R Satija
Nature Reviews Immunology 18 (1), 35-45, 2018
12422018
Multiplexed detection of proteins, transcriptomes, clonotypes and CRISPR perturbations in single cells
EP Mimitou, A Cheng, A Montalbano, S Hao, M Stoeckius, M Legut, ...
Nature methods 16 (5), 409-412, 2019
4092019
Loss of BAP1 function leads to EZH2-dependent transformation
LM LaFave, W Béguelin, R Koche, M Teater, B Spitzer, A Chramiec, ...
Nature medicine 21 (11), 1344-1349, 2015
3552015
JAK–STAT pathway activation in malignant and nonmalignant cells contributes to MPN pathogenesis and therapeutic response
M Kleppe, M Kwak, P Koppikar, M Riester, M Keller, L Bastian, T Hricik, ...
Cancer discovery 5 (3), 316-331, 2015
302*2015
Dual targeting of oncogenic activation and inflammatory signaling increases therapeutic efficacy in myeloproliferative neoplasms
M Kleppe, R Koche, L Zou, P van Galen, CE Hill, L Dong, S De Groote, ...
Cancer cell 33 (1), 29-43. e7, 2018
2712018
Scalable, multimodal profiling of chromatin accessibility, gene expression and protein levels in single cells
EP Mimitou, CA Lareau, KY Chen, AL Zorzetto-Fernandes, Y Hao, ...
Nature biotechnology 39 (10), 1246-1258, 2021
2672021
Dose-dependent role of the cohesin complex in normal and malignant hematopoiesis
AD Viny, CJ Ott, B Spitzer, M Rivas, C Meydan, E Papalexi, D Yelin, ...
Journal of Experimental Medicine 212 (11), 1819-1832, 2015
1552015
Molecular transitions in early progenitors during human cord blood hematopoiesis
S Zheng, E Papalexi, A Butler, W Stephenson, R Satija
Molecular systems biology 14 (3), e8041, 2018
1442018
Characterizing the molecular regulation of inhibitory immune checkpoints with multimodal single-cell screens
E Papalexi, EP Mimitou, AW Butler, S Foster, B Bracken, WM Mauck III, ...
Nature genetics 53 (3), 322-331, 2021
1142021
JAK2/IDH-mutant–driven myeloproliferative neoplasm is sensitive to combined targeted inhibition
AS McKenney, AN Lau, AVH Somasundara, B Spitzer, AM Intlekofer, ...
The Journal of clinical investigation 128 (2), 789-804, 2018
772018
Kinetics of adult hematopoietic stem cell differentiation in vivo
S Upadhaya, CM Sawai, E Papalexi, A Rashidfarrokhi, G Jang, ...
Journal of Experimental Medicine 215 (11), 2815-2832, 2018
752018
Jak1 integrates cytokine sensing to regulate hematopoietic stem cell function and stress hematopoiesis
M Kleppe, MH Spitzer, S Li, CE Hill, L Dong, E Papalexi, S De Groote, ...
Cell stem cell 21 (4), 489-501. e7, 2017
752017
1: CAS: 528: DC% 2BC1MXhtFens77L: Comprehensive integration of single-cell data. vol. 177
T Stuart, A Butler, P Hoffman, C Hafemeister, E Papalexi, WM Mauck
e21. Cell, 1888-1902, 2019
432019
Tumor-specific HSP90 inhibition as a therapeutic approach in JAK-mutant acute lymphoblastic leukemias
N Kucine, S Marubayashi, N Bhagwat, E Papalexi, P Koppikar, ...
Blood, The Journal of the American Society of Hematology 126 (22), 2479-2483, 2015
422015
A latent subset of human hematopoietic stem cells resists regenerative stress to preserve stemness
KB Kaufmann, AGX Zeng, E Coyaud, L Garcia-Prat, E Papalexi, ...
Nature immunology 22 (6), 723-734, 2021
332021
Efficient combinatorial targeting of RNA transcripts in single cells with Cas13 RNA Perturb-seq
HH Wessels, A Méndez-Mancilla, Y Hao, E Papalexi, WM Mauck III, L Lu, ...
Nature methods 20 (1), 86-94, 2023
272023
Lysine-specific histone demethylase, LSD1,(KDM1A) as a novel therapeutic target in myeloproliferative neoplasms
M Kleppe, K Shank, P Efthymia, H Riehnhoff, RL Levine
Blood 126 (23), 601, 2015
142015
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