| NetMHCpan-4.0: improved peptide–MHC class I interaction predictions integrating eluted ligand and peptide binding affinity data V Jurtz, S Paul, M Andreatta, P Marcatili, B Peters, M Nielsen The Journal of Immunology 199 (9), 3360-3368, 2017 | 488 | 2017 |
| BepiPred-2.0: improving sequence-based B-cell epitope prediction using conformational epitopes MC Jespersen, B Peters, M Nielsen, P Marcatili Nucleic acids research 45 (W1), W24-W29, 2017 | 362 | 2017 |
| Improved methods for predicting peptide binding affinity to MHC class II molecules KK Jensen, M Andreatta, P Marcatili, S Buus, JA Greenbaum, Z Yan, ... Immunology 154 (3), 394-406, 2018 | 254 | 2018 |
| PIGS: automatic prediction of antibody structures P Marcatili, A Rosi, A Tramontano Bioinformatics 24 (17), 1953-1954, 2008 | 169 | 2008 |
| NetSurfP‐2.0: Improved prediction of protein structural features by integrated deep learning MS Klausen, MC Jespersen, H Nielsen, KK Jensen, VI Jurtz, ... Proteins: Structure, Function, and Bioinformatics 87 (6), 520-527, 2019 | 121 | 2019 |
| Stereotyped patterns of B-cell receptor in splenic marginal zone lymphoma S Zibellini, D Capello, F Forconi, P Marcatili, D Rossi, S Rattotti, ... haematologica, haematol. 2010.025437 v1, 2010 | 87 | 2010 |
| On the mechanism of chloroquine resistance in Plasmodium falciparum M Chinappi, A Via, P Marcatili, A Tramontano PloS one 5 (11), e14064, 2010 | 70 | 2010 |
| Prediction of site-specific interactions in antibody-antigen complexes: the proABC method and server PP Olimpieri, A Chailyan, A Tramontano, P Marcatili Bioinformatics 29 (18), 2285-2291, 2013 | 63 | 2013 |
| IEDB-AR: immune epitope database—analysis resource in 2019 SK Dhanda, S Mahajan, S Paul, Z Yan, H Kim, MC Jespersen, V Jurtz, ... Nucleic acids research 47 (W1), W502-W506, 2019 | 59 | 2019 |
| The association of heavy and light chain variable domains in antibodies: implications for antigen specificity A Chailyan, P Marcatili, A Tramontano FEBS Journal, 2011 | 58 | 2011 |
| Effects of natural selection and gene conversion on the evolution of human glycophorins coding for MNS blood polymorphisms in malaria-endemic African populations WY Ko, KA Kaercher, E Giombini, P Marcatili, A Froment, M Ibrahim, ... The American Journal of Human Genetics 88 (6), 741-754, 2011 | 54 | 2011 |
| Antibody informatics for drug discovery H Shirai, C Prades, R Vita, P Marcatili, B Popovic, J Xu, JP Overington, ... Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics 1844 (11), 2002-2015, 2014 | 48 | 2014 |
| The ABCD database: a repository for chemically defined antibodies WC Lima, E Gasteiger, P Marcatili, P Duek, A Bairoch, P Cosson Nucleic acids research 48 (D1), D261-D264, 2020 | 47 | 2020 |
| T cell receptor fingerprinting enables in-depth characterization of the interactions governing recognition of peptide–MHC complexes AK Bentzen, L Such, KK Jensen, AM Marquard, LE Jessen, NJ Miller, ... Nature biotechnology 36 (12), 1191-1196, 2018 | 42 | 2018 |
| A database of immunoglobulins with integrated tools: DIGIT A Chailyan, A Tramontano, P Marcatili Nucleic Acids Research 40 (D1), D1230-D1234, 2012 | 42 | 2012 |
| Structural repertoire of immunoglobulin λ light chains A Chailyan, P Marcatili, D Cirillo, A Tramontano Proteins: Structure, Function, and Bioinformatics 79 (5), 1513-1524, 2011 | 39 | 2011 |
| FunClust: a web server for the identification of structural motifs in a set of non-homologous protein structures G Ausiello, PF Gherardini, P Marcatili, A Tramontano, A Via, ... BMC bioinformatics 9 (Suppl 2), S2, 2008 | 37 | 2008 |
| LYRA, a webserver for lymphocyte receptor structural modeling MS Klausen, MV Anderson, MC Jespersen, M Nielsen, P Marcatili Nucleic Acids Research 43 (W1), W349-W355, 2015 | 34 | 2015 |
| Identification of new autoantigens by protein array indicates a role for IL4 neutralization in Autoimmune Hepatitis C Zingaretti, A Cardaci, M Moro, M Crosti, A Sinisi, E Sugliano, C Cheroni, ... Molecular & Cellular Proteomics, 2012 | 34 | 2012 |
| Improving the accuracy of the structure prediction of the third hypervariable loop of the heavy chains of antibodies MA Messih, R Lepore, P Marcatili, A Tramontano Bioinformatics 30 (19), 2733-2740, 2014 | 30 | 2014 |
Morten NielsenDepartment of Health Technology, The Technical University ofEmail verificata su cbs.dtu.dk
