Pejman Mohammadi
Pejman Mohammadi
Assistant professor, The Scripps Research Institute
Email verificata su scripps.edu - Home page
TitoloCitata daAnno
Genetic effects on gene expression across human tissues
GTEx Consortium
Nature 550 (7675), 204, 2017
7032017
Tools and best practices for data processing in allelic expression analysis
SE Castel, A Levy-Moonshine, P Mohammadi, E Banks, T Lappalainen
Genome biology 16 (1), 195, 2015
1652015
Dynamic landscape and regulation of RNA editing in mammals
MH Tan, Q Li, R Shanmugam, R Piskol, J Kohler, AN Young, KI Liu, ...
Nature 550 (7675), 249, 2017
1262017
24 hours in the life of HIV-1 in a T cell line
P Mohammadi, S Desfarges, I Bartha, B Joos, N Zangger, M Mu˝oz, ...
PLoS Pathog 9 (1), e1003161, 2013
1072013
IFI16 is required for DNA sensing in human macrophages by promoting production and function of cGAMP
KL J°nsson, A Laustsen, C Krapp, KA Skipper, K Thavachelvam, D Hotter, ...
Nature communications 8, 14391, 2017
932017
Co-expression networks reveal the tissue-specific regulation of transcription and splicing
A Saha, Y Kim, ADH Gewirtz, B Jo, C Gao, IC McDowell, BE Engelhardt, ...
Genome research 27 (11), 1843-1858, 2017
572017
Dynamics of HIV latency and reactivation in a primary CD4+ T cell model
P Mohammadi, J Di Iulio, M Munoz, R Martinez, I Bartha, M Cavassini, ...
PLoS pathogens 10 (5), e1004156, 2014
562014
A primer on deep learning in genomics
J Zou, M Huss, A Abid, P Mohammadi, A Torkamani, A Telenti
Nature genetics 51 (1), 12-18, 2019
532019
Modified penetrance of coding variants by cis-regulatory variation contributes to disease risk
SE Castel, A Cervera, P Mohammadi, F Aguet, F Reverter, A Wolman, ...
Nature genetics 50 (9), 1327, 2018
482018
Local genetic effects on gene expression across 44 human tissues
F Aguet, AA Brown, S Castel, JR Davis, P Mohammadi, AV Segre, ...
BiorXiv, 074450, 2016
462016
TiMEx: A Waiting Time Model for Mutually Exclusive Cancer Alterations
S Constantinescu, E Szczurek, P Mohammadi, J RahnenfŘhrer, ...
Bioinformatics, 2015
372015
Genetic regulatory effects modified by immune activation contribute to autoimmune disease associations
S Kim-Hellmuth, M Bechheim, B PŘtz, P Mohammadi, Y NÚdÚlec, ...
Nature communications 8 (1), 266, 2017
322017
Rare variant phasing and haplotypic expression from RNA sequencing with phASER
SE Castel, P Mohammadi, WK Chung, Y Shen, T Lappalainen
Nature communications 7, 12817, 2016
282016
Analysis of stop-gain and frameshift variants in human innate immunity genes
A Rausell, P Mohammadi, PJ McLaren, I Bartha, I Xenarios, J Fellay, ...
PLoS computational biology 10 (7), e1003757, 2014
262014
Quantifying the regulatory effect size of cis-acting genetic variation using allelic fold change
P Mohammadi, SE Castel, AA Brown, T Lappalainen
Genome research 27 (11), 1872-1884, 2017
252017
Identifying cis-mediators for trans-eQTLs across many human tissues using genomic mediation analysis
F Yang, J Wang, BL Pierce, LS Chen, F Aguet, KG Ardlie, BB Cummings, ...
Genome research 27 (11), 1859-1871, 2017
212017
The characteristics of heterozygous protein truncating variants in the human genome
I Bartha, A Rausell, PJ McLaren, P Mohammadi, M Tardaguila, ...
PLoS computational biology 11 (12), e1004647, 2015
172015
Automated design of synthetic cell classifier circuits using a two-step optimization strategy
P Mohammadi, N Beerenwinkel, Y Benenson
Cell systems 4 (2), 207-218. e14, 2017
162017
Differential expression of lncRNAs during the HIV replication cycle: an underestimated layer in the HIV-host interplay
W Trypsteen, P Mohammadi, C Van Hecke, P Mestdagh, S Lefever, ...
Scientific reports 6, 36111, 2016
15*2016
BMix: probabilistic modeling of occurring substitutions in PAR-CLIP data
M Golumbeanu, P Mohammadi, N Beerenwinkel
Bioinformatics 32 (7), 976-983, 2015
122015
Il sistema al momento non pu˛ eseguire l'operazione. Riprova pi¨ tardi.
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