High-confidence assessment of functional impact of human mitochondrial non-synonymous genome variations by APOGEE S Castellana, C Fusilli, G Mazzoccoli, T Biagini, D Capocefalo, M Carella, ... PLoS computational biology 13 (6), e1005628, 2017 | 66 | 2017 |
Molecular dynamics recipes for genome research T Biagini, G Chillemi, G Mazzoccoli, A Grottesi, C Fusilli, D Capocefalo, ... Briefings in Bioinformatics 19 (5), 853-862, 2018 | 29 | 2018 |
Analysis of clock gene-miRNA correlation networks reveals candidate drivers in colorectal cancer G Mazzoccoli, T Colangelo, A Panza, R Rubino, C Tiberio, O Palumbo, ... Oncotarget 7 (29), 45444, 2016 | 26 | 2016 |
Insights from molecular characterization of adult patients of families with multigenerational diabetes S Pezzilli, O Ludovico, T Biagini, L Mercuri, F Alberico, E Lauricella, ... Diabetes 67 (1), 137-145, 2018 | 25 | 2018 |
Are gaming-enabled graphic processing unit cards convenient for molecular dynamics simulation? T Biagini, F Petrizzelli, M Truglio, R Cespa, A Barbieri, D Capocefalo, ... Evolutionary Bioinformatics 15, 1176934319850144, 2019 | 23 | 2019 |
Systematic analysis of mouse genome reveals distinct evolutionary and functional properties among circadian and ultradian genes S Castellana, T Mazza, D Capocefalo, N Genov, T Biagini, C Fusilli, ... Frontiers in physiology 9, 1178, 2018 | 21 | 2018 |
Multifaceted enrichment analysis of RNA–RNA crosstalk reveals cooperating micro-societies in human colorectal cancer T Mazza, G Mazzoccoli, C Fusilli, D Capocefalo, A Panza, T Biagini, ... Nucleic acids research 44 (9), 4025-4036, 2016 | 18 | 2016 |
A primary tumor gene expression signature identifies a crucial role played by tumor stroma myofibroblasts in lymph node involvement in oral squamous cell carcinoma G Mazzoccoli, S Castellana, M Carella, O Palumbo, C Tiberio, C Fusilli, ... Oncotarget 8 (62), 104913, 2017 | 15 | 2017 |
Pyntacle: a parallel computing-enabled framework for large-scale network biology analysis L Parca, M Truglio, T Biagini, S Castellana, F Petrizzelli, D Capocefalo, ... GigaScience 9 (10), giaa115, 2020 | 14 | 2020 |
Food web topology and nested keystone species complexes D Capocefalo, J Pereira, T Mazza, F Jordán Complexity 2018 (1), 1979214, 2018 | 12 | 2018 |
MicroRNA co-expression networks exhibit increased complexity in pancreatic ductal compared to Vater's papilla adenocarcinoma T Mazza, M Copetti, D Capocefalo, C Fusilli, T Biagini, M Carella, ... Oncotarget 8 (62), 105320, 2017 | 10 | 2017 |
A multi-layered study on harmonic oscillations in mammalian genomics and proteomics N Genov, S Castellana, F Scholkmann, D Capocefalo, M Truglio, J Rosati, ... International journal of molecular sciences 20 (18), 4585, 2019 | 8 | 2019 |
KMT2D haploinsufficiency in Kabuki syndrome disrupts neuronal function through transcriptional and chromatin rewiring independent of H3K4-monomethylation M Gabriele, A Vitriolo, S Cuvertino, MF Pereira, C Franconi, PL Germain, ... bioRxiv, 2021.04. 22.440945, 2021 | 5 | 2021 |
Curation of causal interactions mediated by genes associated with autism accelerates the understanding of gene-phenotype relationships underlying neurodevelopmental disorders M Iannuccelli, A Vitriolo, L Licata, P Lo Surdo, S Contino, C Cheroni, ... Molecular Psychiatry 29 (1), 186-196, 2024 | 3 | 2024 |
7q11. 23 CNV alters protein synthesis and REST-mediated neuronal intrinsic excitability M Mihailovich, PL Germain, R Shyti, D Pozzi, R Noberini, Y Liu, D Aprile, ... bioRxiv, 2022.10. 10.511483, 2022 | 3 | 2022 |
Multiscale modeling uncovers 7q11. 23 copy number variation–dependent changes in ribosomal biogenesis and neuronal maturation and excitability M Mihailovich, PL Germain, R Shyti, D Pozzi, R Noberini, Y Liu, D Aprile, ... The Journal of clinical investigation 134 (14), 2024 | 1 | 2024 |
Correction: Curation of causal interactions mediated by genes associated with autism accelerates the understanding of gene-phenotype relationships underlying neurodevelopmental … M Iannuccelli, A Vitriolo, L Licata, P Lo Surdo, S Contino, C Cheroni, ... Molecular Psychiatry, 1-1, 2024 | | 2024 |
IL-23 tunes inflammatory functions of human mucosal-associated invariant T (MAIT) cells L Camard, T Stephen, H Yahia-Cherbal, V Guillemot, S Mella, V Baillet, ... bioRxiv, 2024.08. 29.609178, 2024 | | 2024 |
Reverse engineering of natural systems by graph theory D Capocefalo Università degli Studi di Roma" La Sapienza", 2019 | | 2019 |