Noe Frank
TitleCited byYear
Markov models of molecular kinetics: Generation and validation
JH Prinz, H Wu, M Sarich, B Keller, M Senne, M Held, JD Chodera, ...
The Journal of chemical physics 134, 174105, 2011
7172011
Constructing the equilibrium ensemble of folding pathways from short off-equilibrium simulations
F Noé, C Schütte, E Vanden-Eijnden, L Reich, TR Weikl
Proceedings of the National Academy of Sciences 106 (45), 19011, 2009
5702009
Transition networks for modeling the kinetics of conformational change in macromolecules
F Noé, S Fischer
Current opinion in structural biology 18 (2), 154-162, 2008
3922008
Identification of slow molecular order parameters for Markov model construction
G Pérez-Hernández, F Paul, T Giorgino, G De Fabritiis, F Noé
The Journal of chemical physics 139 (1), 07B604_1, 2013
3902013
Hierarchical analysis of conformational dynamics in biomolecules: Transition networks of metastable states
F Noé, I Horenko, C Schütte, JC Smith
The Journal of chemical physics 126, 155102, 2007
3662007
Markov state models of biomolecular conformational dynamics
JD Chodera, F Noé
Current opinion in structural biology 25, 135-144, 2014
3272014
An introduction to Markov state models and their application to long timescale molecular simulation
GR Bowman, VS Pande, F Noé
Springer Science & Business Media, 2013
2812013
Spatiotemporal control of endocytosis by phosphatidylinositol-3, 4-bisphosphate
Y Posor, M Eichhorn-Gruenig, D Puchkov, J Schöneberg, A Ullrich, ...
Nature 499 (7457), 233, 2013
2792013
PyEMMA 2: A software package for estimation, validation, and analysis of Markov models
MK Scherer, B Trendelkamp-Schroer, F Paul, G Pérez-Hernández, ...
Journal of chemical theory and computation 11 (11), 5525-5542, 2015
2712015
Crystal structure of nucleotide-free dynamin
K Faelber, Y Posor, S Gao, M Held, Y Roske, D Schulze, V Haucke, F Noé, ...
Nature, 2011
2582011
On the approximation quality of Markov state models
M Sarich, F Noé, C Schütte
Multiscale Modeling & Simulation 8, 1154, 2010
227*2010
Protein conformational plasticity and complex ligand-binding kinetics explored by atomistic simulations and Markov models
N Plattner, F Noé
Nature communications 6, 7653, 2015
1892015
Probability distributions of molecular observables computed from Markov models
F Noé
The Journal of chemical physics 128, 244103, 2008
1832008
Markov state models based on milestoning
C Schütte, F Noé, J Lu, M Sarich, E Vanden-Eijnden
The Journal of chemical physics 134, 204105, 2011
1702011
Dynamical fingerprints for probing individual relaxation processes in biomolecular dynamics with simulations and kinetic experiments
F Noé, S Doose, I Daidone, M Löllmann, M Sauer, JD Chodera, JC Smith
Proceedings of the National Academy of Sciences 108 (12), 4822, 2011
164*2011
Variational approach to molecular kinetics
F Nüske, BG Keller, G Pérez-Hernández, ASJS Mey, F Noé
Journal of chemical theory and computation 10 (4), 1739-1752, 2014
1522014
A variational approach to modeling slow processes in stochastic dynamical systems
F Noé, F Nuske
Multiscale Modeling & Simulation 11 (2), 635-655, 2013
1522013
EMMA: a software package for Markov model building and analysis
M Senne, B Trendelkamp-Schroer, ASJS Mey, C Schütte, F Noé
Journal of chemical theory and computation 8 (7), 2223-2238, 2012
1332012
Major histocompatibility complex (MHC) class I and MHC class II proteins: conformational plasticity in antigen presentation
M Wieczorek, ET Abualrous, J Sticht, M Álvaro-Benito, S Stolzenberg, ...
Frontiers in immunology 8, 292, 2017
1212017
HTMD: high-throughput molecular dynamics for molecular discovery
S Doerr, MJ Harvey, F Noé, G De Fabritiis
Journal of chemical theory and computation 12 (4), 1845-1852, 2016
1182016
The system can't perform the operation now. Try again later.
Articles 1–20