Marco S. Nobile - Google Scholar Citations

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Paolo CazzanigaAssistant Professor, University of BergamoVerified email at unibg.it
Daniela BesozziAssociate Professor, University of Milano-BicoccaVerified email at unimib.it
Giancarlo MauriProfessor of Computer Science - University of Milano-BicoccaVerified email at disco.unimib.it
Simone SpolaorPh.D. student, University of Milano-BicoccaVerified email at disco.unimib.it
Gabriella PasiUniversità degli Studi di Milano BicoccaVerified email at disco.unimib.it
Daniele RamazzottiSchool of Medicine and Surgery, University of Milano-Bicocca, Milano, ItalyVerified email at unimib.it
Carlos F. LopezAssistant Professor of Biochemistry, Vanderbilt UniversityVerified email at vanderbilt.edu
Leonard A. HarrisVanderbilt University School of MedicineVerified email at cornell.edu
Lilia AlberghinaEmeritus Professor of Biochemistry, University of Milano-BicoccaVerified email at unimib.it
Hideki NakayamaThe University of Tokyo, Associate ProfessorVerified email at ci.i.u-tokyo.ac.jp
Ivan MerelliResearcher in Bioinformatics, Institute for Biomedical TechnologiesVerified email at itb.cnr.it
P. Lió, Pietro Lio, P. Lio, Pietro Liò, Pie...University of CambridgeVerified email at cam.ac.uk
Changhee HanPh.D. Student in Computer Science, The University of TokyoVerified email at nlab.ci.i.u-tokyo.ac.jp
Luca ManzoniDipartimento di Matematica e Geoscienze, Università degli Studi di TriesteVerified email at units.it
Thalia VlachouPost-doctoral fellow, European Institute of OncologyVerified email at ieo.it
Caro FuchsUniversity of Technology EindhovenVerified email at tue.nl
Uzay KaymakProfessor of information systems in the healthcare, Eindhoven University of TechnologyVerified email at tue.nl
Aleš ZamudaAssistant Professor, University of MariborVerified email at um.si
Roman SenkerikTomas Bata University in Zlin, Faculty of Applied InformaticsVerified email at utb.cz
Leonardo VanneschiNOVA IMS, Universidade Nova de LisboaVerified email at isegi.unl.pt

Marco S. Nobile

Assistant Professor, TU/e - Eindhoven University of Technology

Verified email at tue.nl - Homepage

Computational Intelligence Particle Swarm Optimization Evolutionary Computation GPGPU Computing Systems Biology


Title	Cited by	Year
Graphics Processing Units in Bioinformatics, Computational Biology and Systems Biology MS Nobile, P Cazzaniga, A Tangherloni, D Besozzi Briefings in Bioinformatics 18 (5), 870-885, 2016	51	2016
A GPU-based multi-swarm PSO method for parameter estimation in stochastic biological systems exploiting discrete-time target series MS Nobile, D Besozzi, P Cazzaniga, G Mauri, D Pescini Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics …, 2012	49	2012
Fuzzy Self-Tuning PSO: A settings-free algorithm for global optimization MS Nobile, P Cazzaniga, D Besozzi, R Colombo, G Mauri, G Pasi Swarm and Evolutionary Computation 39, 70-85, 2018	38	2018
GPU-accelerated simulations of mass-action kinetics models with cupSODA MS Nobile, P Cazzaniga, D Besozzi, G Mauri The Journal of Supercomputing 69 (1), 17-24, 2014	38	2014
Computational strategies for a system-level understanding of metabolism P Cazzaniga, C Damiani, D Besozzi, R Colombo, MS Nobile, D Gaglio, ... Metabolites 4 (4), 1034-1087, 2014	36	2014
cuTauLeaping: A GPU-powered tau-leaping stochastic simulator for massive parallel analyses of biological systems MS Nobile, P Cazzaniga, D Besozzi, D Pescini, G Mauri PLoS One 9 (3), e91963, 2014	29	2014
The impact of particles initialization in PSO: parameter estimation as a case in point P Cazzaniga, MS Nobile, D Besozzi 2015 IEEE Conference on Computational Intelligence in Bioinformatics and …, 2015	23	2015
Proactive particles in swarm optimization: a self-tuning algorithm based on fuzzy logic MS Nobile, G Pasi, P Cazzaniga, D Besozzi, R Colombo, G Mauri 2015 IEEE International Conference on Fuzzy Systems (FUZZ-IEEE), 1-8, 2015	22	2015
Reverse engineering of kinetic reaction networks by means of Cartesian Genetic Programming and Particle Swarm Optimization MS Nobile, D Besozzi, P Cazzaniga, D Pescini, G Mauri 2013 IEEE Congress on Evolutionary Computation, 1594-1601, 2013	18	2013
cupSODA: a CUDA-powered simulator of mass-action kinetics MS Nobile, D Besozzi, P Cazzaniga, G Mauri, D Pescini International Conference on Parallel Computing Technologies, 344-357, 2013	17	2013
Estimating reaction constants in stochastic biological systems with a multi-swarm PSO running on GPUs MS Nobile, D Besozzi, P Cazzaniga, G Mauri, D Pescini Proceedings of the 14th annual conference companion on Genetic and …, 2012	16	2012
MedGA: a novel evolutionary method for image enhancement in medical imaging systems L Rundo, A Tangherloni, MS Nobile, C Militello, D Besozzi, G Mauri, ... Expert Systems with Applications 119, 387-399, 2019	15	2019
Proactive particles in swarm optimization: A settings-free algorithm for real-parameter single objective optimization problems A Tangherloni, L Rundo, MS Nobile 2017 IEEE Congress on Evolutionary Computation (CEC), 1940-1947, 2017	12	2017
Computational intelligence for parameter estimation of biochemical systems MS Nobile, A Tangherloni, L Rundo, S Spolaor, D Besozzi, G Mauri, ... 2018 IEEE Congress on Evolutionary Computation (CEC), 1-8, 2018	11	2018
LASSIE: simulating large-scale models of biochemical systems on GPUs A Tangherloni, MS Nobile, D Besozzi, G Mauri, P Cazzaniga BMC Bioinformatics 18 (1), 246, 2017	10	2017
Reboot strategies in particle swarm optimization and their impact on parameter estimation of biochemical systems S Spolaor, A Tangherloni, L Rundo, MS Nobile, P Cazzaniga 2017 IEEE Conference on Computational Intelligence in Bioinformatics and …, 2017	9	2017
The foundation of Evolutionary Petri Nets MS Nobile, D Besozzi, P Cazzaniga, G Mauri 4th International Workshop on Biological Processes & Petri Nets (BioPPN 2013 …, 2013	9	2013
GPU-powered model analysis with PySB/cupSODA LA Harris, MS Nobile, JC Pino, ALR Lubbock, D Besozzi, G Mauri, ... Bioinformatics 33 (21), 3492-3494, 2017	8	2017
Massive exploration of perturbed conditions of the blood coagulation cascade through GPU parallelization P Cazzaniga, MS Nobile, D Besozzi, M Bellini, G Mauri BioMed research international 2014, 2014	7	2014
Parallel implementation of efficient search schemes for the inference of cancer progression models D Ramazzotti, MS Nobile, P Cazzaniga, G Mauri, M Antoniotti 2016 IEEE Conference on Computational Intelligence in Bioinformatics and …, 2016	6	2016

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