Marco S. Nobile
TitoloCitata daAnno
A GPU-based multi-swarm PSO method for parameter estimation in stochastic biological systems exploiting discrete-time target series
MS Nobile, D Besozzi, P Cazzaniga, G Mauri, D Pescini
Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics …, 2012
432012
Graphics Processing Units in Bioinformatics, Computational Biology and Systems Biology
MS Nobile, P Cazzaniga, A Tangherloni, D Besozzi
Briefings in Bioinformatics 18 (5), 870-885, 2016
412016
GPU-accelerated simulations of mass-action kinetics models with cupSODA
MS Nobile, P Cazzaniga, D Besozzi, G Mauri
The Journal of Supercomputing 69 (1), 17-24, 2014
372014
Computational strategies for a system-level understanding of metabolism
P Cazzaniga, C Damiani, D Besozzi, R Colombo, M Nobile, D Gaglio, ...
Metabolites 4 (4), 1034-1087, 2014
322014
cuTauLeaping: A GPU-powered tau-leaping stochastic simulator for massive parallel analyses of biological systems
MS Nobile, P Cazzaniga, D Besozzi, D Pescini, G Mauri
PLoS One 9 (3), e91963, 2014
282014
Fuzzy Self-Tuning PSO: A settings-free algorithm for global optimization
MS Nobile, P Cazzaniga, D Besozzi, R Colombo, G Mauri, G Pasi
Swarm and Evolutionary Computation 39, 70-85, 2018
252018
The impact of particles initialization in PSO: parameter estimation as a case in point
P Cazzaniga, MS Nobile, D Besozzi
2015 IEEE Conference on Computational Intelligence in Bioinformatics and …, 2015
192015
Reverse engineering of kinetic reaction networks by means of Cartesian Genetic Programming and Particle Swarm Optimization
MS Nobile, D Besozzi, P Cazzaniga, D Pescini, G Mauri
2013 IEEE Congress on Evolutionary Computation, 1594-1601, 2013
192013
Proactive particles in swarm optimization: a self-tuning algorithm based on fuzzy logic
MS Nobile, G Pasi, P Cazzaniga, D Besozzi, R Colombo, G Mauri
2015 IEEE International Conference on Fuzzy Systems (FUZZ-IEEE), 1-8, 2015
182015
cupSODA: a CUDA-powered simulator of mass-action kinetics
MS Nobile, D Besozzi, P Cazzaniga, G Mauri, D Pescini
International Conference on Parallel Computing Technologies, 344-357, 2013
172013
Estimating reaction constants in stochastic biological systems with a multi-swarm PSO running on GPUs
MS Nobile, D Besozzi, P Cazzaniga, G Mauri, D Pescini
Proceedings of the 14th annual conference companion on Genetic and …, 2012
132012
MedGA: a novel evolutionary method for image enhancement in medical imaging systems
L Rundo, A Tangherloni, MS Nobile, C Militello, D Besozzi, G Mauri, ...
Expert Systems with Applications 119, 387-399, 2019
82019
LASSIE: simulating large-scale models of biochemical systems on GPUs
A Tangherloni, MS Nobile, D Besozzi, G Mauri, P Cazzaniga
BMC Bioinformatics 18 (1), 246, 2017
82017
Proactive particles in swarm optimization: A settings-free algorithm for real-parameter single objective optimization problems
A Tangherloni, L Rundo, MS Nobile
2017 IEEE Congress on Evolutionary Computation (CEC), 1940-1947, 2017
72017
Massive exploration of perturbed conditions of the blood coagulation cascade through GPU parallelization
P Cazzaniga, MS Nobile, D Besozzi, M Bellini, G Mauri
BioMed research international 2014, 2014
72014
The foundation of Evolutionary Petri Nets
MS Nobile, D Besozzi, P Cazzaniga, G Mauri
4th International Workshop on Biological Processes & Petri Nets (BioPPN 2013 …, 2013
72013
Reboot strategies in particle swarm optimization and their impact on parameter estimation of biochemical systems
S Spolaor, A Tangherloni, L Rundo, MS Nobile, P Cazzaniga
2017 IEEE Conference on Computational Intelligence in Bioinformatics and …, 2017
62017
Parallel implementation of efficient search schemes for the inference of cancer progression models
D Ramazzotti, MS Nobile, P Cazzaniga, G Mauri, M Antoniotti
2016 IEEE Conference on Computational Intelligence in Bioinformatics and …, 2016
62016
GPU-powered model analysis with PySB/cupSODA
LA Harris, MS Nobile, JC Pino, ALR Lubbock, D Besozzi, G Mauri, ...
Bioinformatics 33 (21), 3492-3494, 2017
52017
Efficient simulation of reaction systems on graphics processing units
MS Nobile, AE Porreca, S Spolaor, L Manzoni, P Cazzaniga, G Mauri, ...
Fundamenta Informaticae 154 (1-4), 307-321, 2017
52017
Il sistema al momento non può eseguire l'operazione. Riprova più tardi.
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