| Toward empirical force fields that match experimental observables T Fröhlking, M Bernetti, N Calonaci, G Bussi The Journal of chemical physics 152 (23), 2020 | 69 | 2020 |
| Machine learning a model for RNA structure prediction N Calonaci, A Jones, F Cuturello, M Sattler, G Bussi NAR Genomics and Bioinformatics 2 (4), 2020 | 30 | 2020 |
| A Bayesian method to cluster single-cell RNA sequencing data using copy number alterations S Milite, R Bergamin, L Patruno, N Calonaci, G Caravagna Bioinformatics 38 (9), 2512-2518, 2022 | 10 | 2022 |
| Clonal KEAP1 mutations with loss of heterozygosity share reduced immunotherapy efficacy and low immune cell infiltration in lung adenocarcinoma S Scalera, B Ricciuti, M Mazzotta, N Calonaci, JV Alessi, L Cipriani, G Bon, ... Annals of Oncology 34 (3), 275-288, 2023 | 6 | 2023 |
| Computational validation of clonal and subclonal copy number alterations from bulk tumor sequencing using CNAqc A Antonello, R Bergamin, N Calonaci, J Househam, S Milite, MJ Williams, ... Genome Biology 25 (1), 1-40, 2024 | 5* | 2024 |
| Effect of nematic ordering on the elasticity and yielding in disordered polymeric solids A Giuntoli, N Calonaci, S Bernini, D Leporini Journal of Polymer Science Part B: Polymer Physics 55 (23), 1760-1769, 2017 | 5 | 2017 |
| Molecular dynamics simulations with grand-canonical reweighting suggest cooperativity effects in RNA structure probing experiments N Calonaci, M Bernetti, A Jones, M Sattler, G Bussi Journal of chemical theory and computation 19 (12), 3672-3685, 2023 | 3 | 2023 |
| A Bayesian method to infer copy number clones from single-cell RNA and ATAC sequencing L Patruno, S Milite, R Bergamin, N Calonaci, A D’Onofrio, F Anselmi, ... PLOS Computational Biology 19 (11), e1011557, 2023 | 1 | 2023 |
| Time of Origin and Environmental Drivers of Leukemia Immune Escape after Transplantation C Toffalori, R Bergamin, A Antonello, AF Tortorelli, G Orofino, M Cristante, ... Blood 142, 362, 2023 | | 2023 |
| Clonal Evolution of Chronic Lymphocytic Leukemia with Bimodal CD49d Expression Reveals CD49d Plasticity E Tissino, N Calonaci, F Pozzo, G Forestieri, L Terzi Di Bergamo, F Vit, ... Blood 140 (Supplement 1), 9844-9846, 2022 | | 2022 |
| Computational investigations of structure probing experiments for RNA structure prediction N Calonaci SISSA, 2020 | | 2020 |
| Elasticity and yielding in model polymer glasses N CALONACI Universita` di Pisa, 2016 | | 2016 |
