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Ivan Bochkov
Ivan Bochkov
Graduate Student, Baylor College of Medicine
Verified email at bcm.edu
Title
Cited by
Cited by
Year
A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping
SSP Rao, MH Huntley, NC Durand, EK Stamenova, ID Bochkov, ...
Cell 159 (7), 1665-1680, 2014
72132014
Chromatin extrusion explains key features of loop and domain formation in wild-type and engineered genomes
AL Sanborn, SSP Rao, SC Huang, NC Durand, MH Huntley, AI Jewett, ...
Proceedings of the National Academy of Sciences 112 (47), E6456-E6465, 2015
16562015
Cohesin loss eliminates all loop domains
SSP Rao, SC Huang, BG St Hilaire, JM Engreitz, EM Perez, ...
Cell 171 (2), 305-320. e24, 2017
15912017
A new dynamical model for the black hole binary LMC X-1
JA Orosz, D Steeghs, JE McClintock, MAP Torres, I Bochkov, L Gou, ...
The Astrophysical Journal 697 (1), 573, 2009
1622009
Large DNA methylation nadirs anchor chromatin loops maintaining hematopoietic stem cell identity
X Zhang, M Jeong, X Huang, XQ Wang, X Wang, W Zhou, MS Shamim, ...
Molecular cell 78 (3), 506-521. e6, 2020
692020
The ENCODE uniform analysis pipelines
BC Hitz, JW Lee, O Jolanki, MS Kagda, K Graham, P Sud, I Gabdank, ...
Research Square, 2023
222023
Somatic structural variant formation is guided by and influences genome architecture
N Sidiropoulos, BR Mardin, FG Rodríguez-González, ID Bochkov, S Garg, ...
Genome research 32 (4), 643-655, 2022
162022
A cell type-specific class of chromatin loops anchored at large DNA methylation nadirs
M Jeong, X Huang, X Zhang, J Su, MS Shamim, ID Bochkov, J Reyes, ...
Biorxiv, 212928, 2017
142017
Limited Evidence for Parallel Evolution Among Desert-Adapted Peromyscus Deer Mice
JP Colella, A Tigano, O Dudchenko, AD Omer, R Khan, ID Bochkov, ...
Journal of Heredity 112 (3), 286-302, 2021
102021
The Hi-Culfite assay reveals relationships between chromatin contacts and DNA methylation state
EK Stamenova, NC Durand, O Dudchenko, MS Shamim, SC Huang, ...
Biorxiv, 481283, 2018
42018
Chromatin Extrusion Explains Key Features of Loop and Domain Formation in Wild‐type and Engineered Genomes
A Sanborn, S Rao, SC Huang, N Durand, M Huntley, A Jewett, I Bochkov, ...
The FASEB Journal 30, 588.1-588.1, 2016
42016
Multiple Evolutionary Pathways to Achieve Thermal Adaptation in Small Mammals
JP Colella, A Tigano, O Dudchenko, AD Omer, R Khan, ID Bochkov, ...
bioRxiv, 2020
22020
Changes in 3D Genome Architecture During Chondrocyte Differentiation in the Pathogenesis of Human Chondrodysplasias
IW Song, I Bochkov, Y Bae, E Aiden, B Lee
JOURNAL OF BONE AND MINERAL RESEARCH 34, 74-74, 2019
2019
Large DNA Methylation Canyons Anchor Chromatin Loops Maintaining Hematopoietic Stem Cell Identity
M Jeong, X Huang, X Zhang, J Su, MS Shamim, ID Bochkov, JM Reyes, ...
Blood, The Journal of the American Society of Hematology 132 (Supplement 1 …, 2018
2018
High Order Chromatin Structure Regulates Gene Expression in Hematopoietic Stem Cell Self-Renewal and Erythroid Differentiation
X Zhang, M Jeong, I Bochkov, MS Shamim, EL Aiden, M Goodell
Blood 128 (22), 1033, 2016
2016
Crispr Engineering in CD34+ Progenitors Reveals Cis-Acting Regulatory Regions Mediating 3D Interactions and Stem Cell Fate Decisions
M Jeong, Y Lei, I Bochkov, MS Shamim, AG Guzman, SC Huang, ...
Blood 128 (22), 1466, 2016
2016
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