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Imad Abugessaisa
Imad Abugessaisa
RIKEN Center for Integrative Medical Sciences (IMS)
Verified email at riken.jp - Homepage
Title
Cited by
Cited by
Year
An atlas of human long non-coding RNAs with accurate 5′ ends
CC Hon, JA Ramilowski, J Harshbarger, N Bertin, OJL Rackham, J Gough, ...
Nature 543 (7644), 199-204, 2017
9912017
Gateways to the FANTOM5 promoter level mammalian expression atlas
M Lizio, J Harshbarger, H Shimoji, J Severin, T Kasukawa, S Sahin, ...
Genome biology 16, 1-14, 2015
8302015
Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells
E Arner, CO Daub, K Vitting-Seerup, R Andersson, B Lilje, F Drabløs, ...
Science 347 (6225), 1010-1014, 2015
5952015
An integrated expression atlas of miRNAs and their promoters in human and mouse
D De Rie, I Abugessaisa, T Alam, E Arner, P Arner, H Ashoor, G Åström, ...
Nature biotechnology 35 (9), 872-878, 2017
5422017
Data integration in the era of omics: current and future challenges
D Gomez-Cabrero, I Abugessaisa, D Maier, A Teschendorff, ...
BMC systems biology 8, 1-10, 2014
4662014
FANTOM5 CAGE profiles of human and mouse samples
S Noguchi, T Arakawa, S Fukuda, M Furuno, A Hasegawa, F Hori, ...
Scientific data 4 (1), 1-10, 2017
2282017
Update of the FANTOM web resource: expansion to provide additional transcriptome atlases
M Lizio, I Abugessaisa, S Noguchi, A Kondo, A Hasegawa, CC Hon, ...
Nucleic acids research 47 (D1), D752-D758, 2019
1972019
Practical Guide to Life Science Databases
I Abugessaisa, T Kasukawa
1362021
Functional annotation of human long noncoding RNAs via molecular phenotyping
JA Ramilowski, CW Yip, S Agrawal, JC Chang, Y Ciani, IV Kulakovskiy, ...
Genome research 30 (7), 1060-1072, 2020
1322020
C1 CAGE detects transcription start sites and enhancer activity at single-cell resolution
T Kouno, J Moody, ATJ Kwon, Y Shibayama, S Kato, Y Huang, M Böttcher, ...
Nature communications 10 (1), 360, 2019
1142019
Update of the FANTOM web resource: high resolution transcriptome of diverse cell types in mammals
M Lizio, J Harshbarger, I Abugessaisa, S Noguchi, A Kondo, J Severin, ...
Nucleic acids research, gkw995, 2016
1042016
FANTOM5 transcriptome catalog of cellular states based on Semantic MediaWiki
I Abugessaisa, H Shimoji, S Sahin, A Kondo, J Harshbarger, M Lizio, ...
Database 2016, baw105, 2016
812016
refTSS: a reference data set for human and mouse transcription start sites
I Abugessaisa, S Noguchi, A Hasegawa, A Kondo, H Kawaji, P Carninci, ...
Journal of molecular biology 431 (13), 2407-2422, 2019
702019
FANTOM enters 20th year: expansion of transcriptomic atlases and functional annotation of non-coding RNAs
I Abugessaisa, JA Ramilowski, M Lizio, J Severin, A Hasegawa, ...
Nucleic acids research 49 (D1), D892-D898, 2021
662021
FANTOM5 CAGE profiles of human and mouse reprocessed for GRCh38 and GRCm38 genome assemblies
I Abugessaisa, S Noguchi, A Hasegawa, J Harshbarger, A Kondo, M Lizio, ...
Scientific Data 4 (1), 1-10, 2017
642017
Incidence and risk factors for adalimumab and infliximab anti-drug antibodies in rheumatoid arthritis: a European retrospective multicohort analysis
J Quistrebert, S Hässler, D Bachelet, C Mbogning, A Musters, PP Tak, ...
Seminars in Arthritis and Rheumatism 48 (6), 967-975, 2019
632019
SCPortalen: human and mouse single-cell centric database
I Abugessaisa, S Noguchi, M Böttcher, A Hasegawa, T Kouno, S Kato, ...
Nucleic acids research 46 (D1), D781-D787, 2018
512018
Comparative transcriptomics of primary cells in vertebrates
T Alam, S Agrawal, J Severin, RS Young, R Andersson, E Arner, ...
Genome research 30 (7), 951-961, 2020
372020
Systems Medicine: from molecular features and models to the clinic in COPD
D Gomez-Cabrero, J Menche, I Cano, I Abugessaisa, ...
Journal of Translational Medicine 12, 1-11, 2014
352014
A robust machine learning framework to identify signatures for frailty: a nested case-control study in four aging European cohorts
D Gomez-Cabrero, S Walter, I Abugessaisa, R Miñambres-Herraiz, ...
Geroscience 43 (3), 1317-1329, 2021
342021
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