P. Douglas Renfrew
P. Douglas Renfrew
Simons Foundation
Email verificata su simonsfoundation.org - Home page
Titolo
Citata da
Citata da
Anno
ROSETTA3: an object-oriented software suite for the simulation and design of macromolecules
A Leaver-Fay, M Tyka, SM Lewis, OF Lange, J Thompson, R Jacak, ...
Methods in enzymology 487, 545-574, 2011
11812011
The Rosetta all-atom energy function for macromolecular modeling and design
RF Alford, A Leaver-Fay, JR Jeliazkov, MJ O’Meara, FP DiMaio, H Park, ...
Journal of chemical theory and computation 13 (6), 3031-3048, 2017
2592017
Serverification of molecular modeling applications: the Rosetta Online Server that Includes Everyone (ROSIE)
S Lyskov, FC Chou, S Conchir, BS Der, K Drew, D Kuroda, J Xu, ...
PloS one 8 (5), 2013
2062013
A preliminary survey of the peptoid folding landscape
GL Butterfoss, PD Renfrew, B Kuhlman, K Kirshenbaum, R Bonneau
Journal of the American Chemical Society 131 (46), 16798-16807, 2009
1022009
Incorporation of noncanonical amino acids into Rosetta and use in computational protein-peptide interface design
PD Renfrew, EJ Choi, R Bonneau, B Kuhlman
PLoS One 7 (3), 2012
712012
Engineered coiled-coil protein microfibers
J Hume, J Sun, R Jacquet, PD Renfrew, JA Martin, R Bonneau, ...
Biomacromolecules 15 (10), 3503-3510, 2014
472014
Peptoid atropisomers
B Paul, GL Butterfoss, MG Boswell, PD Renfrew, FG Yeung, NH Shah, ...
Journal of the American Chemical Society 133 (28), 10910-10919, 2011
452011
Adding diverse noncanonical backbones to rosetta: enabling peptidomimetic design
K Drew, PD Renfrew, TW Craven, GL Butterfoss, FC Chou, S Lyskov, ...
PLoS One 8 (7), 2013
442013
A rotamer library to enable modeling and design of peptoid foldamers
PD Renfrew, TW Craven, GL Butterfoss, K Kirshenbaum, R Bonneau
Journal of the American Chemical Society 136 (24), 8772-8782, 2014
342014
Using quantum mechanics to improve estimates of amino acid side chain rotamer energies
PD Renfrew, GL Butterfoss, B Kuhlman
Proteins: Structure, Function, and Bioinformatics 71 (4), 1637-1646, 2008
302008
Oligo(N‐alkoxy glycines): Trans substantiating peptoid conformations
PA Jordan, B Paul, GL Butterfoss, PD Renfrew, R Bonneau, ...
Peptide Science 96 (5), 617-626, 2011
192011
Conformational preferences of peptide–peptoid hybrid oligomers
GL Butterfoss, K Drew, PD Renfrew, K Kirshenbaum, R Bonneau
Peptide Science 102 (5), 369-378, 2014
152014
Improved Stability and Half‐Life of Fluorinated Phosphotriesterase Using Rosetta
CY Yang, PD Renfrew, AJ Olsen, M Zhang, C Yuvienco, R Bonneau, ...
Chembiochem 15 (12), 1761-1764, 2014
92014
Efficient Dual siRNA and Drug Delivery Using Engineered Lipoproteoplexes
CF Liu, R Chen, JA Frezzo, P Katyal, LK Hill, L Yin, N Srivastava, HT More, ...
Biomacromolecules 18 (9), 2688-2698, 2017
52017
Designing Peptides on a Quantum Computer
VK Mulligan, H Melo, HI Merritt, S Slocum, BD Weitzner, AM Watkins, ...
bioRxiv, 752485, 2019
42019
Rotamer libraries for the high-resolution design of β-amino acid foldamers
AM Watkins, TW Craven, PD Renfrew, PS Arora, R Bonneau
Structure 25 (11), 1771-1780. e3, 2017
42017
The 2010 Rosetta developers meeting: macromolecular prediction and design meets reproducible publishing
PD Renfrew, G Campbell, CEM Strauss, R Bonneau
PloS one 6 (8), 2011
42011
CHAPTER NINETEEN ROSETTA3: An Object-Oriented Software Suite for the Simulation and Design of Macromolecules
A Leaver-fay, M Tyka, SM Lewis, F Lange, J Thompson, R Jacak, ...
4
Recent
D Hume, J Sun, R Jacquet, PD Renfrew, JA Martin, R Bonneau, ...
Dialogues Concerning Natural Religion. New York: Library of Liberal Arts, 1778
21778
Thermoresponsive Protein-Engineered Coiled-Coil Hydrogel for Sustained Small Molecule Release
LK Hill, M Meleties, P Katyal, X Xie, E Delgado-Fukushima, T Jihad, ...
Biomacromolecules 20 (9), 3340-3351, 2019
12019
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