Genome sequences of the human body louse and its primary endosymbiont provide insights into the permanent parasitic lifestyle EF Kirkness, BJ Haas, W Sun, HR Braig, MA Perotti, JM Clark, SH Lee, ... Proceedings of the National Academy of Sciences 107 (27), 12168-12173, 2010 | 569 | 2010 |
Haplotype-resolved diverse human genomes and integrated analysis of structural variation P Ebert, PA Audano, Q Zhu, B Rodriguez-Martin, D Porubsky, MJ Bonder, ... Science 372 (6537), eabf7117, 2021 | 434 | 2021 |
High-coverage whole-genome sequencing of the expanded 1000 Genomes Project cohort including 602 trios M Byrska-Bishop, US Evani, X Zhao, AO Basile, HJ Abel, AA Regier, ... Cell 185 (18), 3426-3440. e19, 2022 | 425 | 2022 |
Widespread divergence between incipient Anopheles gambiae species revealed by whole genome sequences MKN Lawniczak, SJ Emrich, AK Holloway, AP Regier, M Olson, B White, ... Science 330 (6003), 512-514, 2010 | 311 | 2010 |
Mapping and characterization of structural variation in 17,795 human genomes HJ Abel, DE Larson, AA Regier, C Chiang, I Das, KL Kanchi, RM Layer, ... Nature 583 (7814), 83-89, 2020 | 218 | 2020 |
Functional equivalence of genome sequencing analysis pipelines enables harmonized variant calling across human genetics projects AA Regier, Y Farjoun, DE Larson, O Krasheninina, HM Kang, ... Nature communications 9 (1), 1-8, 2018 | 186 | 2018 |
Automated assembly of high-quality diploid human reference genomes ED Jarvis, G Formenti, A Rhie, A Guarracino, C Yang, J Wood, A Tracey, ... bioRxiv, 2022 | 105* | 2022 |
Genome modeling system: a knowledge management platform for genomics M Griffith, OL Griffith, SM Smith, A Ramu, MB Callaway, AM Brummett, ... PLoS computational biology 11 (7), e1004274, 2015 | 88 | 2015 |
Breakpoint structure of the Anopheles gambiae 2Rb chromosomal inversion NF Lobo, DM Sangaré, AA Regier, KR Reidenbach, DA Bretz, ... Malaria journal 9 (1), 1-9, 2010 | 45 | 2010 |
High-throughput 454 resequencing for allele discovery and recombination mapping in Plasmodium falciparum U Samarakoon, A Regier, A Tan, BA Desany, B Collins, JC Tan, ... BMC genomics 12 (1), 1-14, 2011 | 35 | 2011 |
Association of structural variation with cardiometabolic traits in Finns L Chen, HJ Abel, I Das, DE Larson, L Ganel, KL Kanchi, AA Regier, ... The American Journal of Human Genetics 108 (4), 583-596, 2021 | 26 | 2021 |
A strategy for building and using a human reference pangenome B Llamas, G Narzisi, V Schneider, PA Audano, E Biederstedt, L Blauvelt, ... F1000Research 8, 2019 | 15 | 2019 |
Mitochondrial genome copy number measured by DNA sequencing in human blood is strongly associated with metabolic traits via cell-type composition differences L Ganel, L Chen, R Christ, J Vangipurapu, E Young, I Das, K Kanchi, ... Human genomics 15 (1), 1-17, 2021 | 13 | 2021 |
Mitochondrial genome copy number in human blood-derived DNA is strongly associated with insulin levels and related metabolic traits and primarily reflects cell-type composition … L Ganel, L Chen, R Christ, J Vangipurapu, E Young, I Das, K Kanchi, ... MedRxiv, 2020 | 1 | 2020 |
A Flexible Comparative Genomics Framework for Integrating Heterogeneous Sequence Data AAP Regier | 1 | 2011 |
Alignment and analysis of closely related genomes A Regier, M Olson, SJ Emrich International Conference on Bioinformatics and Computational Biology, 343-352, 2009 | 1 | 2009 |
Mosaicing videos to stream over multiple independent channels C Boehnen, A Regier, D Thomas, S Chandra, P Flynn Proceedings of the 17th NOSSDAV Conference, 2007 | 1 | 2007 |
Genomic and transcriptomic somatic alterations of hepatocellular carcinoma in non-cirrhotic livers OL Griffith, Y Lin, M Griffith, J Hundal, A Regier, R Fulton, EM Brunt, ... Cancer Research 74 (19_Supplement), 5181-5181, 2014 | | 2014 |
EXAMINING THE FINE SCALE STRUCTURE OF THE CROSSOVER LANDSCAPE IN PLASMODIUM FALCIPARUM BY HIGH-THROUGHPUT ALLELE SCANNING U Samarakoon, A Regier, A Tan, SJ Emrich, MT Ferdig AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE 83 (5), 281-281, 2010 | | 2010 |
Challenges in working with draft genomes AAP Regier University of Notre Dame, 2008 | | 2008 |