On how to improve fpga-based systems design productivity via sdaccel G Guidi, E Reggiani, L Di Tucci, G Durelli, M Blott, MD Santambrogio 2016 IEEE international parallel and distributed processing symposium …, 2016 | 33 | 2016 |
diBELLA: Distributed long read to long read alignment M Ellis, G Guidi, A Buluç, L Oliker, K Yelick Proceedings of the 48th International Conference on Parallel Processing, 1-11, 2019 | 10 | 2019 |
BELLA: Berkeley efficient long-read to long-read aligner and overlapper G Guidi, M Ellis, D Rokhsar, K Yelick, A Buluç bioRxiv, 464420, 2020 | 9 | 2020 |
Logan: High-performance GPU-based x-drop long-read alignment A Zeni, G Guidi, M Ellis, N Ding, MD Santambrogio, S Hofmeyr, A Buluç, ... 2020 IEEE International Parallel and Distributed Processing Symposium (IPDPS …, 2020 | 5 | 2020 |
Distributed many-to-many protein sequence alignment using sparse matrices O Selvitopi, S Ekanayake, G Guidi, G Pavlopoulos, A Azad, A Buluc arXiv preprint arXiv:2009.14467, 2020 | 3 | 2020 |
The parallelism motifs of genomic data analysis K Yelick, A Buluç, M Awan, A Azad, B Brock, R Egan, S Ekanayake, ... Philosophical Transactions of the Royal Society A 378 (2166), 20190394, 2020 | 3 | 2020 |
Profax: A hardware acceleration of a protein folding algorithm G Guidi, L Di Tucci, MD Santambrogio 2016 IEEE 2nd International Forum on Research and Technologies for Society …, 2016 | 2 | 2016 |
HUGenomics: A support to personalized medicine research L Di Tucci, G Guidi, S Notargiacomo, L Cerina, A Scolari, ... 2017 IEEE 3rd International Forum on Research and Technologies for Society …, 2017 | 1 | 2017 |
10 Years Later: Cloud Computing is Closing the Performance Gap G Guidi, M Ellis, A Buluc, K Yelick, D Culler arXiv preprint arXiv:2011.00656, 2020 | | 2020 |
Parallel String Graph Construction and Transitive Reduction for De Novo Genome Assembly G Guidi, O Selvitopi, M Ellis, L Oliker, K Yelick, A Buluc arXiv preprint arXiv:2010.10055, 2020 | | 2020 |
Efficient long-read overlap detection and alignment for De Novo genome assembly G GUIDI Italy, 2018 | | 2018 |