| RNAstructure: web servers for RNA secondary structure prediction and analysis S Bellaousov, JS Reuter, MG Seetin, DH Mathews Nucleic acids research 41 (W1), W471-W474, 2013 | 404 | 2013 |
| Accurate SHAPE-directed RNA secondary structure modeling, including pseudoknots CE Hajdin, S Bellaousov, W Huggins, CW Leonard, DH Mathews, ... Proceedings of the National Academy of Sciences 110 (14), 5498-5503, 2013 | 340 | 2013 |
| ProbKnot: fast prediction of RNA secondary structure including pseudoknots S Bellaousov, DH Mathews Rna 16 (10), 1870-1880, 2010 | 212 | 2010 |
| O-GlcNAc regulates gene expression by controlling detained intron splicing ZW Tan, G Fei, JA Paulo, S Bellaousov, SES Martin, DY Duveau, ... Nucleic acids research 48 (10), 5656-5669, 2020 | 76 | 2020 |
| mRNAs and lncRNAs intrinsically form secondary structures with short end-to-end distances WJC Lai, M Kayedkhordeh, EV Cornell, E Farah, S Bellaousov, ... Nature communications 9 (1), 4328, 2018 | 74 | 2018 |
| Sharing and archiving nucleic acid structure mapping data P Rocca-Serra, S Bellaousov, A Birmingham, C Chen, P Cordero, R Das, ... Rna 17 (7), 1204-1212, 2011 | 36 | 2011 |
| Pyrvinium pamoate changes alternative splicing of the serotonin receptor 2C by influencing its RNA structure M Shen, S Bellaousov, M Hiller, P de La Grange, TP Creamer, O Malina, ... Nucleic acids research 41 (6), 3819-3832, 2013 | 33 | 2013 |
| Nuclear magnetic resonance-assisted prediction of secondary structure for RNA: incorporation of direction-dependent chemical shift constraints JL Chen, S Bellaousov, JD Tubbs, SD Kennedy, MJ Lopez, DH Mathews, ... Biochemistry 54 (45), 6769-6782, 2015 | 15 | 2015 |
| Transcriptional Regulation on Aneuploid Chromosomes in Diverse Candida albicans Mutants C Tucker, S Bhattacharya, H Wakabayashi, S Bellaousov, A Kravets, ... Scientific Reports 8 (1), 1630, 2018 | 14 | 2018 |
| Accelerated RNA secondary structure design using preselected sequences for helices and loops S Bellaousov, M Kayedkhordeh, RJ Peterson, DH Mathews RNA 24 (11), 1555-1567, 2018 | 13 | 2018 |
| Oncogenic CDK13 mutations impede nuclear RNA surveillance ML Insco, BJ Abraham, SJ Dubbury, IH Kaltheuner, S Dust, C Wu, ... Science 380 (6642), eabn7625, 2023 | 10 | 2023 |
| Structure-function model for kissing loop interactions that initiate dimerization of Ty1 RNA ER Gamache, JH Doh, J Ritz, A Laederach, S Bellaousov, DH Mathews, ... Viruses 9 (5), 93, 2017 | 8 | 2017 |
| RNA secondary structure determination by NMR JL Chen, S Bellaousov, DH Turner RNA Structure Determination: Methods and Protocols, 177-186, 2016 | 7 | 2016 |
| The formation of intramolecular secondary structure brings mRNA ends in close proximity WJC Lai, M Kayedkhordeh, EV Cornell, E Farah, S Bellaousov, ... bioRxiv, 289496, 2018 | 3 | 2018 |
| CDK13 Mutations Drive Melanoma via Accumulation of Prematurely Terminated Transcripts ML Insco, BJ Abraham, SJ Dubbury, S Dust, C Wu, KY Chen, D Liu, ... bioRxiv, 824193, 2019 | 1 | 2019 |
| Transcriptional Regulation on Aneuploid Chromosomes in Diverse Candida albicans Mutants (vol 8, 1630, 2018) C Tucker, S Bhattacharya, H Wakabayashi, S Bellaousov, A Kravets, ... SCIENTIFIC REPORTS 9, 2019 | | 2019 |
| Author Correction: Transcriptional Regulation on Aneuploid Chromosomes in Diverse Candida albicans Mutants C Tucker, S Bhattacharya, H Wakabayashi, S Bellaousov, A Kravets, ... Scientific Reports 9, 2019 | | 2019 |
| 98 Improving nucleic acid design using biased sequence initialization M Kayedkhordeh, S Bellaousov, DH Mathews Journal of Biomolecular Structure and Dynamics 33 (sup1), 62-63, 2015 | | 2015 |
| Structure and Thermodynamics of Aegis Nucleotides P and Z in DNA X Wang, KK Sharp, S Hoshika, S Bellaousov, X Zhang, DH Mathews, ... Biophysical Journal 108 (2), 395a, 2015 | | 2015 |
| Improving and applying RNA secondary structure prediction S Bellaousov | | 2014 |
David H. MathewsDepartment of Biochemistry and Biophysics, University of Rochester Medical CenterEmail verificata su urmc.rochester.edu
