Candida albicans JL Binder, KJ Parra, SA Lee, HS Rane, SM Bernardo, SM Raines | 339 | 2013 |
Candida albicans VMA3 Is Necessary for V-ATPase Assembly and Function and Contributes to Secretion and Filamentation HS Rane, SM Bernardo, SM Raines, JL Binder, KJ Parra, SA Lee Eukaryotic cell 12 (10), 1369-1382, 2013 | 55 | 2013 |
Proteopathic tau primes and activates interleukin-1β via myeloid-cell-specific MyD88-and NLRP3-ASC-inflammasome pathway S Jiang, NM Maphis, J Binder, D Chisholm, L Weston, W Duran, ... Cell reports 36 (12), 2021 | 49 | 2021 |
AlphaFold illuminates half of the dark human proteins JL Binder, J Berendzen, AO Stevens, Y He, J Wang, NV Dokholyan, ... Current opinion in structural biology 74, 102372, 2022 | 45 | 2022 |
Deletion of vacuolar proton-translocating ATPase Voa isoforms clarifies the role of vacuolar pH as a determinant of virulence-associated traits in Candida albicans SM Raines, HS Rane, SM Bernardo, JL Binder, SA Lee, KJ Parra Journal of Biological Chemistry 288 (9), 6190-6201, 2013 | 33 | 2013 |
The Contribution of Candida albicans Vacuolar ATPase Subunit V1B, Encoded by VMA2, to Stress Response, Autophagy, and Virulence Is Independent of … HS Rane, SM Bernardo, SR Hayek, JL Binder, KJ Parra, SA Lee Eukaryotic Cell 13 (9), 1207-1221, 2014 | 31 | 2014 |
Whole genome expression analysis in a mouse model of tauopathy identifies MECP2 as a possible regulator of tau pathology NM Maphis, S Jiang, J Binder, C Wright, B Gopalan, BT Lamb, K Bhaskar Frontiers in molecular neuroscience 10, 69, 2017 | 29 | 2017 |
Machine learning prediction and tau-based screening identifies potential Alzheimer’s disease genes relevant to immunity J Binder, O Ursu, C Bologa, S Jiang, N Maphis, S Dadras, D Chisholm, ... Communications Biology 5 (1), 125, 2022 | 27 | 2022 |
Interpretable deep learning translation of GWAS and multi-omics findings to identify pathobiology and drug repurposing in Alzheimer’s disease J Xu, C Mao, Y Hou, Y Luo, JL Binder, Y Zhou, LM Bekris, J Shin, M Hu, ... Cell reports 41 (9), 111717, 2022 | 25 | 2022 |
Optical induction of autophagy via Transcription factor EB (TFEB) reduces pathological tau in neurons JL Binder, P Chander, V Deretic, JP Weick, K Bhaskar PLoS One 15 (3), e0230026, 2020 | 21 | 2020 |
Getting started with the IDG KMC datasets and tools E Kropiwnicki, JL Binder, JJ Yang, J Holmes, A Lachmann, DJB Clarke, ... Current protocols 2 (1), e355, 2022 | 7 | 2022 |
Knowledge graph analytics platform with LINCS and IDG for Parkinson's disease target illumination JJ Yang, CR Gessner, JL Duerksen, D Biber, JL Binder, M Ozturk, B Foote, ... BMC bioinformatics 23 (1), 37, 2022 | 5 | 2022 |
Sequential intraparticle Förster resonance energy transfer for multi-wavelength bioimaging HW Jones, MK Burdette, Y Bandera, E Zhang, IK Foulger, J Binder, ... Optical Materials Express 11 (6), 1742-1755, 2021 | 5 | 2021 |
Deletion of V-ATPase Voa isoforms clarifies the role of vacuolar pH as a determinant of virulence-associated traits in C. albicans SM Raines, H Rane, SM Bernardo, JL Binder, SA Lee, KJ Parra J. Biol. Chem 288, 6190-6201, 2013 | 4 | 2013 |
Clustering rare diseases within an ontology-enriched knowledge graph J Sanjak, J Binder, AS Yadaw, Q Zhu, EA Mathé Journal of the American Medical Informatics Association 31 (1), 154-164, 2024 | 3 | 2024 |
Toxicology knowledge graph for structural birth defects JE Evangelista, DJB Clarke, Z Xie, GB Marino, V Utti, SL Jenkins, ... Communications Medicine 3 (1), 98, 2023 | 2 | 2023 |
AlphaFold models illuminate half of dark human proteins JL Binder, J Berendzen, AO Stevens, Y He, J Wang, NV Dokholyan, ... bioRxiv, 2021.11. 04.467322, 2021 | 2 | 2021 |
ReproTox-KG: toxicology knowledge graph for structural birth defects JE Evangelista, DJB Clarke, Z Xie, GB Marino, V Utti, TM Ahooyi, ... bioRxiv, 2022.09. 15.508198, 2022 | 1 | 2022 |
SmartGraph API: Programmatic Knowledge Mining in Network-Pharmacology Setting G Zahoránszky-Kőhalmi, B Walker, N Miller, B Yang, DVL Penna, J Binder, ... | | 2024 |
Proteopathic tau primes and activates interleukin-1ß (IL-1ß) via MyD88-and NLRP3-ASC-inflammasome dependent pathways cell-autonomous to microglia S Jiang, NM Maphis, J Binder, D Chisholm, L Weston, W Duran, C Floruta, ... | | 2021 |