VIPERdb2 : an enhanced and web API enabled relational database for structural virology M Carrillo-Tripp, CM Shepherd, IA Borelli, S Venkataraman, G Lander, ...
Nucleic acids research 37 (suppl_1), D436-D442, 2009
454 2009 A comparative study of the hydration of and with refined polarizable model potentials M Carrillo-Tripp, H Saint-Martin, I Ortega-Blake
The Journal of Chemical Physics 118 (15), 7062-7073, 2003
190 2003 Evidence for a mechanism by which ω-3 polyunsaturated lipids may affect membrane protein function M Carrillo-Tripp, SE Feller
Biochemistry 44 (30), 10164-10169, 2005
114 2005 Antagonism or synergism between papaya ringspot virus and papaya mosaic virus in Carica papaya is determined by their order of infection G Chávez-Calvillo, CA Contreras-Paredes, J Mora-Macias, ...
Virology 489, 179-191, 2016
82 2016 Minimalist molecular model for nanopore selectivity M Carrillo-Tripp, H Saint-Martin, I Ortega-Blake
Physical review letters 93 (16), 168104, 2004
71 2004 Ion hydration in nanopores and the molecular basis of selectivity M Carrillo-Tripp, ML San-Román, J Hernańdez-Cobos, H Saint-Martin, ...
Biophysical Chemistry 124 (3), 243-250, 2006
51 2006 VIPERdb v3. 0: a structure-based data analytics platform for viral capsids D Montiel-Garcia, N Santoyo-Rivera, P Ho, M Carrillo-Tripp, CLB Iii, ...
Nucleic acids research 49 (D1), D809-D816, 2021
41 2021 Evolution of substrate specificity in a recipient’s enzyme following horizontal gene transfer L Noda-García, AR Camacho-Zarco, S Medina-Ruíz, P Gaytán, ...
Molecular biology and evolution 30 (9), 2024-2034, 2013
40 2013 An amphotericin B derivative equally potent to amphotericin B and with increased safety A Antillón, AH De Vries, M Espinosa-Caballero, JM Falcón-González, ...
PLoS One 11 (9), e0162171, 2016
32 2016 VIPERdb: a tool for virus research PT Ho, DJ Montiel-Garcia, JJ Wong, M Carrillo-Tripp, CL Brooks III, ...
Annual Review of Virology 5, 477-488, 2018
31 2018 A Theoretical Study of the Hydration of Li+ by Monte Carlo Simulations with Refined Ab Initio Based Model Potentials ML San-Román, M Carrillo-Tripp, H Saint-Martin, J Hernández-Cobos, ...
Theoretical Chemistry Accounts 115, 177-189, 2006
28 2006 Evolution of substrate specificity in a retained enzyme driven by gene loss AL Juarez-Vazquez, JN Edirisinghe, EA Verduzco-Castro, K Michalska, ...
Elife 6, e22679, 2017
26 2017 HTMoL: full-stack solution for remote access, visualization, and analysis of molecular dynamics trajectory data M Carrillo-Tripp, L Alvarez-Rivera, OI Lara-Ramírez, FJ Becerra-Toledo, ...
Journal of computer-aided molecular design 32, 869-876, 2018
23 2018 Multi-phase solvation model for biological membranes: molecular action mechanism of amphotericin B JM Falcón-González, G Jiménez-Domínguez, I Ortega-Blake, ...
Journal of Chemical Theory and Computation 13 (7), 3388-3397, 2017
22 2017 Highly efficient strategy for the heterologous expression and purification of soluble cowpea chlorotic mottle virus capsid protein and in vitro pH-dependent assembly of virus … A Díaz-Valle, YM García-Salcedo, G Chávez-Calvillo, L Silva-Rosales, ...
Journal of virological methods 225, 23-29, 2015
22 2015 A novel method to map and compare protein–protein interactions in spherical viral capsids M Carrillo‐Tripp, CL Brooks III, VS Reddy
Proteins: Structure, Function, and Bioinformatics 73 (3), 644-655, 2008
20 2008 Insights into the evolution of enzyme substrate promiscuity after the discovery of (βα)8 isomerase evolutionary intermediates from a diverse metagenome L Noda-García, AL Juárez-Vázquez, MC Ávila-Arcos, EA Verduzco-Castro, ...
BMC Evolutionary Biology 15, 1-14, 2015
17 2015 Analyzing structural alterations of mitochondrial intermembrane space superoxide scavengers cytochrome-c and SOD1 after methylglyoxal treatment H Mercado-Uribe, M Andrade-Medina, JH Espinoza-Rodríguez, ...
PLoS One 15 (4), e0232408, 2020
13 2020 CapsidMaps: Protein–protein interaction pattern discovery platform for the structural analysis of virus capsids using Google Maps M Carrillo-Tripp, DJ Montiel-García, CL Brooks III, VS Reddy
Journal of structural biology 190 (1), 47-55, 2015
12 2015 Plant-based chimeric HPV-virus-like particles bearing amyloid-β epitopes elicit antibodies able to recognize amyloid plaques in APP-tg mouse and Alzheimer’s disease brains R Gonzalez-Castro, G Acero Galindo, Y García Salcedo, ...
Inflammopharmacology 26, 817-827, 2018
11 2018